RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SESN1Q9Y6P5 492 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 DNAL1Q4LDG9 190 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 RASGRP4Q8TDF6 673 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 MEFVO15553 781 aaPredicted RBP17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 PYGMP11217 842 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 TBXAS1P24557 533 aaPredicted RBP17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 ZBED8Q8IZ13 594 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 CCNYL1Q8N7R7 359 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 COG1Q8WTW3 980 aa17.91■□□□□ 0.46
SMCHD1-201ENST00000320876 A0A087WWV3 80 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 LOC102724159A0A0B4J2E5 919 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 KCTD2Q14681 263 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 KRT72Q14CN4 511 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 PWP2Q15269 919 aaKnown RBP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 HIF1AQ16665 826 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 C16orf89Q6UX73 402 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 BTNL9Q6UXG8 535 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 ZNF280CQ8ND82 737 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 MRPL1Q9BYD6 325 aaKnown RBP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 FTOQ9C0B1 505 aaKnown RBP eCLIP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 CCND1P24385 295 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 SLC13A1Q9BZW2 595 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 RUBCNLQ9H714 662 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 VIPAS39Q9H9C1 493 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 ATP1A3P13637 1013 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 CYTH1Q15438 398 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 ACBD5Q5T8D3 534 aaPredicted RBP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 CCDC137Q6PK04 289 aaKnown RBP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 UNC13DQ70J99 1090 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 GSPT2Q8IYD1 628 aaKnown RBP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 CYGBQ8WWM9 190 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 NT5C2P49902 561 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 ABCE1P61221 599 aaKnown RBP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 STK32BQ9NY57 414 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 ZNF804BA4D1E1 1349 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 FAM187AA6NFU0 413 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 ITPRIPL1Q6GPH6 555 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 KIAA1841Q6NSI8 718 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 EDEM3Q9BZQ6 932 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 GPR108Q9NPR9 543 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 SMG5Q9UPR3 1016 aaKnown RBP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 ATP10BO94823 1461 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 PFASO15067 1338 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 BRD2P25440 801 aaKnown RBP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 CACNB1Q02641 598 aaPredicted RBP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 CEP78Q5JTW2 689 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 DDIASQ8IXT1 998 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 MAFGO15525 162 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 SLC9A1P19634 815 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 AARS2Q5JTZ9 985 aaKnown RBP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 TNIP2Q8NFZ5 429 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 ZNF564Q8TBZ8 553 aaPredicted RBP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 TRIM8Q9BZR9 551 aa17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 OSBPL5Q9H0X9 879 aaPredicted RBP17.9■□□□□ 0.46
SMCHD1-201ENST00000320876 NLRP11P59045 1033 aaKnown RBP17.89■□□□□ 0.46
SMCHD1-201ENST00000320876 LBRQ14739 615 aaKnown RBP17.89■□□□□ 0.46
SMCHD1-201ENST00000320876 HEATR6Q6AI08 1181 aaKnown RBP17.89■□□□□ 0.46
SMCHD1-201ENST00000320876 KIRREL3Q8IZU9 778 aa17.89■□□□□ 0.46
SMCHD1-201ENST00000320876 IFNAR1P17181 557 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 CCNA1P78396 465 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 CHRNDQ07001 517 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 TFDP2Q14188 446 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 OLFML2BQ68BL8 750 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 SPATA17Q96L03 361 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 LRRC53A6NM62 1247 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 RESTQ13127 1097 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 AGGF1Q8N302 714 aaeCLIP17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 CHAMP1Q96JM3 812 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 ANTXR1Q9H6X2 564 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 IP6K2Q9UHH9 426 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 ORC4O43929 436 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 PDE8BO95263 885 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 TEX2Q8IWB9 1127 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 ADAMTS12P58397 1594 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 SPATA21Q7Z572 469 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 ZNF589Q86UQ0 364 aaPredicted RBP17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 EME1Q96AY2 570 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 KANSL2Q9H9L4 492 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 CNOT8Q9UFF9 292 aaKnown RBP17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 XDHP47989 1333 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 PNMA6FA0A0J9YX94 578 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 ANKRD65E5RJM6 399 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 PCCAP05165 728 aaPredicted RBP17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 TBC1D10BQ4KMP7 808 aaPredicted RBP17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 SYDE1Q6ZW31 735 aaPredicted RBP17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 SRLQ86TD4 932 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 POU5F1BQ06416 359 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 PPP4R4Q6NUP7 873 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 ZBTB33Q86T24 672 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.89■□□□□ 0.453e-9■■■■■ 80.2
SMCHD1-201ENST00000320876 KIAA1586Q9HCI6 787 aa17.89■□□□□ 0.45
SMCHD1-201ENST00000320876 SCNN1DP51172 638 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 SPICE1Q8N0Z3 855 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 NGRNQ9NPE2 291 aaKnown RBP17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 GOLGA8TH3BQL2 631 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 COPRSQ9NQ92 184 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 CYP21A2P08686 494 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 JAK3P52333 1124 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 RUNX1T1Q06455 604 aa17.88■□□□□ 0.45
SMCHD1-201ENST00000320876 ZNF496Q96IT1 587 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms