RNA–Protein interactions for RNA: ENST00000320161.10

SGIP1-202, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 680 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-202ENST00000320161 USTQ9Y2C2 406 aa9.41□□□□□ -0.9
SGIP1-202ENST00000320161 SSX2IPQ9Y2D8 614 aa9.41□□□□□ -0.9
SGIP1-202ENST00000320161 DDX11L8A8MPP1 907 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 C2CD4DB7Z1M9 353 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 STK25O00506 426 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 MSH4O15457 936 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 MARCH6O60337 910 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 NR1I2O75469 434 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 FGFR4P22455 802 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 KLRC2P26717 231 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 FOXK2Q01167 660 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 ADCK5Q3MIX3 580 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 NOMO2Q5JPE7 1267 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 ASTLQ6HA08 431 aaPredicted RBP9.4□□□□□ -0.9
SGIP1-202ENST00000320161 CCDC149Q6ZUS6 474 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 DDX53Q86TM3 631 aaKnown RBP9.4□□□□□ -0.9
SGIP1-202ENST00000320161 ZDHHC14Q8IZN3 488 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 SLC7A3Q8WY07 619 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 PHKBQ93100 1093 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 MS4A3Q96HJ5 214 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 SNX27Q96L92 541 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 NLRP4Q96MN2 994 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 SFXN1Q9H9B4 322 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 SCUBE2Q9NQ36 999 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 SH3GLB2Q9NR46 395 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 CYP26B1Q9NR63 512 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 KANSL3Q9P2N6 904 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 SUCLA2Q9P2R7 463 aaPredicted RBP9.4□□□□□ -0.9
SGIP1-202ENST00000320161 LIMD1Q9UGP4 676 aa9.4□□□□□ -0.9
SGIP1-202ENST00000320161 PLXNA3P51805 1871 aa9.4□□□□□ -0.91
SGIP1-202ENST00000320161 A0A087WZ62 844 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 ZNF862O60290 1169 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 BRD1O95696 1058 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 CTSAP10619 480 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 CLCN5P51795 746 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 SSRP1Q08945 709 aaKnown RBP9.39□□□□□ -0.91
SGIP1-202ENST00000320161 COL9A3Q14050 684 aaPredicted RBP9.39□□□□□ -0.91
SGIP1-202ENST00000320161 LONRF3Q496Y0 759 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 CENPQQ7L2Z9 268 aaPredicted RBP9.39□□□□□ -0.91
SGIP1-202ENST00000320161 ZNF598Q86UK7 904 aaKnown RBP9.39□□□□□ -0.91
SGIP1-202ENST00000320161 RASEFQ8IZ41 740 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 LINC01465Q8N7H1 131 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 FLCNQ8NFG4 579 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 TBCKQ8TEA7 893 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 STAMQ92783 540 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 SLC5A5Q92911 643 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 IGSF21Q96ID5 467 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 FDXACB1Q9BRP7 624 aaPredicted RBP9.39□□□□□ -0.91
SGIP1-202ENST00000320161 TRAIPQ9BWF2 469 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 NIFKQ9BYG3 293 aaKnown RBP9.39□□□□□ -0.91
SGIP1-202ENST00000320161 ZBP1Q9H171 429 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 UNC45AQ9H3U1 944 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 MRPL17Q9NRX2 175 aaKnown RBP9.39□□□□□ -0.91
SGIP1-202ENST00000320161 FAM217BQ9NTX9 383 aaPredicted RBP9.39□□□□□ -0.91
SGIP1-202ENST00000320161 FAM105AQ9NUU6 356 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 RNF19AQ9NV58 838 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 VPS54Q9P1Q0 977 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 IRAK3Q9Y616 596 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 ARID2Q68CP9 1835 aa9.39□□□□□ -0.91
SGIP1-202ENST00000320161 CACNA1HO95180 2353 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 PTPRZ1P23471 2315 aaPredicted RBP9.38□□□□□ -0.91
SGIP1-202ENST00000320161 CNTNAP2Q9UHC6 1331 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 CSDE1O75534 798 aaKnown RBP9.38□□□□□ -0.91
SGIP1-202ENST00000320161 ERLIN2O94905 339 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 REC8O95072 547 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 PDGFBP01127 241 aaPredicted RBP9.38□□□□□ -0.91
SGIP1-202ENST00000320161 ALDH2P05091 517 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 SSBP05455 408 aaKnown RBP eCLIP9.38□□□□□ -0.91
SGIP1-202ENST00000320161 URODP06132 367 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 ASGR2P07307 311 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 WEE2P0C1S8 567 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 EPCAMP16422 314 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 IFNAR1P17181 557 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 XBP1P17861 261 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 PSMC5P62195 406 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 TDGQ13569 410 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 UGCGQ16739 394 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 Q4G0T1 1027 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 GALNT17Q6IS24 598 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 TMC5Q6UXY8 1006 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 HACE1Q8IYU2 909 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 C12orf76Q8N812 135 aaPredicted RBP9.38□□□□□ -0.91
SGIP1-202ENST00000320161 CNNM3Q8NE01 707 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 AUTS2Q8WXX7 1259 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 LPPQ93052 612 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 NKD2Q969F2 451 aaPredicted RBP9.38□□□□□ -0.91
SGIP1-202ENST00000320161 LENG9Q96B70 501 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 CCDC43Q96MW1 224 aaKnown RBP9.38□□□□□ -0.91
SGIP1-202ENST00000320161 RTP3Q9BQQ7 232 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 RSAD1Q9HA92 442 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 UBN1Q9NPG3 1134 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 TBC1D13Q9NVG8 400 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 FAN1Q9Y2M0 1017 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 PPME1Q9Y570 386 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 COL4A3BPQ9Y5P4 624 aa9.38□□□□□ -0.91
SGIP1-202ENST00000320161 ZFHX2Q9C0A1 2572 aaPredicted RBP9.38□□□□□ -0.91
SGIP1-202ENST00000320161 NID2Q14112 1375 aa9.37□□□□□ -0.91
SGIP1-202ENST00000320161 CCDC194A0A1B0GVG4 234 aa9.37□□□□□ -0.91
SGIP1-202ENST00000320161 GAS2O43903 313 aaKnown RBP9.37□□□□□ -0.91
SGIP1-202ENST00000320161 MAFO75444 373 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms