RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ANO5Q75V66 913 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 RUFY3Q7L099 469 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 TMEM173Q86WV6 379 aaPredicted RBP15.97■□□□□ 0.15
RPP40-201ENST00000319533 UBALD2Q8IYN6 164 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 VPS52Q8N1B4 723 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 SLC22A17Q8WUG5 538 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 ZNF274Q96GC6 653 aaPredicted RBP15.97■□□□□ 0.15
RPP40-201ENST00000319533 IGSF21Q96ID5 467 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 RIPOR3Q96MK2 946 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 JPH2Q9BR39 696 aaPredicted RBP15.97■□□□□ 0.15
RPP40-201ENST00000319533 NRDE2Q9H7Z3 1164 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 FAM105AQ9NUU6 356 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 DZANK1Q9NVP4 752 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 CDH22Q9UJ99 828 aa15.97■□□□□ 0.15
RPP40-201ENST00000319533 C2CD4DB7Z1M9 353 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 OFD1O75665 1012 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 GALTP07902 379 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 PSMC5P62195 406 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 NOMO2Q5JPE7 1267 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 TWF2Q6IBS0 349 aaKnown RBP15.96■□□□□ 0.15
RPP40-201ENST00000319533 KIAA1841Q6NSI8 718 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 GLB1LQ6UWU2 654 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 ZDHHC14Q8IZN3 488 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 KREMEN2Q8NCW0 462 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 SH2D3AQ9BRG2 576 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 IRF2BPLQ9H1B7 796 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 IFT122Q9HBG6 1241 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 TBC1D13Q9NVG8 400 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 SORCS3Q9UPU3 1222 aa15.96■□□□□ 0.15
RPP40-201ENST00000319533 PIN4Q9Y237 131 aaKnown RBP15.96■□□□□ 0.15
RPP40-201ENST00000319533 DDX11L8A8MPP1 907 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 ZC3H11AO75152 810 aaKnown RBP eCLIP15.95■□□□□ 0.14
RPP40-201ENST00000319533 PPP2R5CQ13362 524 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 MRPL10Q7Z7H8 261 aaKnown RBP15.95■□□□□ 0.14
RPP40-201ENST00000319533 RHPN2Q8IUC4 686 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 BCL7CQ8WUZ0 217 aaPredicted RBP15.95■□□□□ 0.14
RPP40-201ENST00000319533 LPPQ93052 612 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 FAM20AQ96MK3 541 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 TM6SF1Q9BZW5 370 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 KCNMB3Q9NPA1 279 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 CYP26B1Q9NR63 512 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 STK39Q9UEW8 545 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 DDX25Q9UHL0 483 aaKnown RBP15.95■□□□□ 0.14
RPP40-201ENST00000319533 VAV3Q9UKW4 847 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 USTQ9Y2C2 406 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 PPME1Q9Y570 386 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 MYO10Q9HD67 2058 aa15.95■□□□□ 0.14
RPP40-201ENST00000319533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.94■□□□□ 0.14
RPP40-201ENST00000319533 MEIS3P2A8K0S8 358 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 EML1O00423 815 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 SLC37A4O43826 429 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 BRD1O95696 1058 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 PDGFBP01127 241 aaPredicted RBP15.94■□□□□ 0.14
RPP40-201ENST00000319533 SP100P23497 879 aaPredicted RBP15.94■□□□□ 0.14
RPP40-201ENST00000319533 QARSP47897 775 aaKnown RBP15.94■□□□□ 0.14
RPP40-201ENST00000319533 MTMR3Q13615 1198 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 NONOQ15233 471 aaKnown RBP eCLIP15.94■□□□□ 0.14
RPP40-201ENST00000319533 PPP4R3AQ6IN85 833 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 AGMOQ6ZNB7 445 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 CATSPER4Q7RTX7 472 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 KRT25Q7Z3Z0 450 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 ZBTB33Q86T24 672 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 KSR1Q8IVT5 923 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 PGBD4Q96DM1 585 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 VN1R3Q9BXE9 311 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 DHX33Q9H6R0 707 aaKnown RBP15.94■□□□□ 0.14
RPP40-201ENST00000319533 AGPAT5Q9NUQ2 364 aa15.94■□□□□ 0.14
RPP40-201ENST00000319533 CPLX1O14810 134 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 B4GALT3O60512 393 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 DKC1O60832 514 aaKnown RBP eCLIP15.93■□□□□ 0.14
RPP40-201ENST00000319533 LILRB3O75022 631 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 EPCAMP16422 314 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 SLC11A1P49279 550 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 PTPN14Q15678 1187 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 INF2Q27J81 1249 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 ATAT1Q5SQI0 421 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 RARS2Q5T160 578 aaKnown RBP15.93■□□□□ 0.14
RPP40-201ENST00000319533 PLA2G4FQ68DD2 849 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 PPFIBP1Q86W92 1011 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 EXOC8Q8IYI6 725 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 C12orf76Q8N812 135 aaPredicted RBP15.93■□□□□ 0.14
RPP40-201ENST00000319533 AUTS2Q8WXX7 1259 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 NLRP4Q96MN2 994 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 AIFM3Q96NN9 605 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 TSHZ2Q9NRE2 1034 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 DNAJB4Q9UDY4 337 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 PCDHB2Q9Y5E7 798 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 COL4A3BPQ9Y5P4 624 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 CYP46A1Q9Y6A2 500 aa15.93■□□□□ 0.14
RPP40-201ENST00000319533 ST18O60284 1047 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 EIF5BO60841 1220 aaKnown RBP15.92■□□□□ 0.14
RPP40-201ENST00000319533 P4HBP07237 508 aaKnown RBP15.92■□□□□ 0.14
RPP40-201ENST00000319533 WEE2P0C1S8 567 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 GCFC2P16383 781 aaKnown RBP15.92■□□□□ 0.14
RPP40-201ENST00000319533 HOXA11P31270 313 aaPredicted RBP15.92■□□□□ 0.14
RPP40-201ENST00000319533 RFC5P40937 340 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 NPEPPSP55786 919 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 LONRF3Q496Y0 759 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 UBXN11Q5T124 520 aa15.92■□□□□ 0.14
RPP40-201ENST00000319533 CPLX2Q6PUV4 134 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms