RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 HS2ST1Q7LGA3 356 aa30.16■■■□□ 2.42
CTDNEP1-201ENST00000318988 U2AF1L4Q8WU68 220 aaKnown RBP30.16■■■□□ 2.42
CTDNEP1-201ENST00000318988 TBX20Q9UMR3 447 aa30.16■■■□□ 2.42
CTDNEP1-201ENST00000318988 NFE2L3Q9Y4A8 694 aa30.16■■■□□ 2.42
CTDNEP1-201ENST00000318988 TRIM49BA6NDI0 452 aa30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 K7ERI5 159 aa30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 CALUO43852 315 aaPredicted RBP30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 PHKA2P46019 1235 aa30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 ANKRD40Q6AI12 368 aa30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 PPP4R3CPQ6ZMV5 832 aa30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 RUFY4Q6ZNE9 571 aa30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 NLRP7Q8WX94 980 aa30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 SEZ6LQ9BYH1 1024 aa30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 TYW1Q9NV66 732 aaKnown RBP30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 NOD1Q9Y239 953 aa30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 GRIN2DO15399 1336 aa30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 ADGRA3Q8IWK6 1321 aa30.15■■■□□ 2.42
CTDNEP1-201ENST00000318988 POU5F1BQ06416 359 aa30.14■■■□□ 2.42
CTDNEP1-201ENST00000318988 KCNA1Q09470 495 aa30.14■■■□□ 2.42
CTDNEP1-201ENST00000318988 UVSSAQ2YD98 709 aa30.14■■■□□ 2.42
CTDNEP1-201ENST00000318988 TTI2Q6NXR4 508 aa30.14■■■□□ 2.42
CTDNEP1-201ENST00000318988 RSPH3Q86UC2 560 aa30.14■■■□□ 2.42
CTDNEP1-201ENST00000318988 NME8Q8N427 588 aa30.14■■■□□ 2.42
CTDNEP1-201ENST00000318988 DNAJB3Q8WWF6 145 aa30.14■■■□□ 2.42
CTDNEP1-201ENST00000318988 GBP3Q9H0R5 595 aa30.14■■■□□ 2.42
CTDNEP1-201ENST00000318988 KCTD10Q9H3F6 313 aa30.14■■■□□ 2.42
CTDNEP1-201ENST00000318988 TMEM134Q9H6X4 195 aa30.14■■■□□ 2.42
CTDNEP1-201ENST00000318988 GRPEL1Q9HAV7 217 aa30.14■■■□□ 2.42
CTDNEP1-201ENST00000318988 PDXKO00764 312 aa30.13■■■□□ 2.41
CTDNEP1-201ENST00000318988 FGFR1OPO95684 399 aaKnown RBP30.13■■■□□ 2.41
CTDNEP1-201ENST00000318988 RPLP2P05387 115 aaKnown RBP30.13■■■□□ 2.41
CTDNEP1-201ENST00000318988 PMS1P54277 932 aaKnown RBP30.13■■■□□ 2.41
CTDNEP1-201ENST00000318988 PTGISQ16647 500 aa30.13■■■□□ 2.41
CTDNEP1-201ENST00000318988 FOXR2Q6PJQ5 311 aa30.13■■■□□ 2.41
CTDNEP1-201ENST00000318988 ZNF710Q8N1W2 664 aa30.13■■■□□ 2.41
CTDNEP1-201ENST00000318988 CSGALNACT2Q8N6G5 542 aa30.13■■■□□ 2.41
CTDNEP1-201ENST00000318988 GOLGA5Q8TBA6 731 aa30.13■■■□□ 2.41
CTDNEP1-201ENST00000318988 BICD1Q96G01 975 aa30.13■■■□□ 2.41
CTDNEP1-201ENST00000318988 PPP1R16BQ96T49 567 aa30.13■■■□□ 2.41
CTDNEP1-201ENST00000318988 CRISPLD2Q9H0B8 497 aa30.13■■■□□ 2.41
CTDNEP1-201ENST00000318988 HOXD13P35453 343 aa30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 NLRP11P59045 1033 aaKnown RBP30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 NCAPHQ15003 741 aa30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 CDCA2Q69YH5 1023 aaPredicted RBP30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 ZNF410Q86VK4 478 aa30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 MAP4K3Q8IVH8 894 aa30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 ZNF668Q96K58 619 aaPredicted RBP30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 MED15Q96RN5 788 aa30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 TMEM106CQ9BVX2 250 aa30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 MRE11P49959 708 aa30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 PTENP60484 403 aa30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 NOC3LQ8WTT2 800 aaKnown RBP30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 NFKBIZQ9BYH8 718 aa30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 FANCLQ9NW38 375 aa30.12■■■□□ 2.41
CTDNEP1-201ENST00000318988 A0A087WZ62 844 aa30.11■■■□□ 2.41
CTDNEP1-201ENST00000318988 GPC3P51654 580 aa30.11■■■□□ 2.41
CTDNEP1-201ENST00000318988 MAPK6Q16659 721 aa30.11■■■□□ 2.41
CTDNEP1-201ENST00000318988 EDRF1Q3B7T1 1238 aa30.11■■■□□ 2.41
CTDNEP1-201ENST00000318988 KCNN1Q92952 543 aa30.11■■■□□ 2.41
CTDNEP1-201ENST00000318988 FDXACB1Q9BRP7 624 aaPredicted RBP30.11■■■□□ 2.41
CTDNEP1-201ENST00000318988 CGNQ9P2M7 1197 aaKnown RBP30.11■■■□□ 2.41
CTDNEP1-201ENST00000318988 TRAF3IP3Q9Y228 551 aa30.11■■■□□ 2.41
CTDNEP1-201ENST00000318988 EVPLQ92817 2033 aa30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 INO80B-WBP1J3KQ70 363 aa30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 M0QZ92 97 aa30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 ARVCFO00192 962 aa30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 RPL13P26373 211 aaKnown RBP30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 SNRPFP62306 86 aaKnown RBP30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 FKBP3Q00688 224 aaKnown RBP30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 TMEM62Q0P6H9 643 aa30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 ZCWPW2Q504Y3 356 aa30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 SERINC5Q86VE9 423 aa30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 DUSP9Q99956 384 aaKnown RBP30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 SRRTQ9BXP5 876 aaKnown RBP30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 INO80BQ9C086 356 aaPredicted RBP30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 GINS2Q9Y248 185 aa30.1■■■□□ 2.41
CTDNEP1-201ENST00000318988 CDK11BP21127 795 aaKnown RBP30.09■■■□□ 2.41
CTDNEP1-201ENST00000318988 GJA8P48165 433 aa30.09■■■□□ 2.41
CTDNEP1-201ENST00000318988 KIZQ2M2Z5 673 aa30.09■■■□□ 2.41
CTDNEP1-201ENST00000318988 GCOM2Q9BZD3 368 aaPredicted RBP30.09■■■□□ 2.41
CTDNEP1-201ENST00000318988 MCOLN1Q9GZU1 580 aa30.09■■■□□ 2.41
CTDNEP1-201ENST00000318988 ZMYM2Q9UBW7 1377 aa30.09■■■□□ 2.41
CTDNEP1-201ENST00000318988 HNRNPDLO14979 420 aaKnown RBP30.08■■■□□ 2.41
CTDNEP1-201ENST00000318988 PLCB2Q00722 1185 aa30.08■■■□□ 2.41
CTDNEP1-201ENST00000318988 SLC43A3Q8NBI5 491 aa30.08■■■□□ 2.41
CTDNEP1-201ENST00000318988 SENP6Q9GZR1 1112 aaPredicted RBP30.08■■■□□ 2.41
CTDNEP1-201ENST00000318988 THAP9Q9H5L6 903 aa30.08■■■□□ 2.41
CTDNEP1-201ENST00000318988 MAGEC2Q9UBF1 373 aaPredicted RBP30.08■■■□□ 2.41
CTDNEP1-201ENST00000318988 TGFB1I1O43294 461 aa30.07■■■□□ 2.4
CTDNEP1-201ENST00000318988 PRKCBP05771 671 aa30.07■■■□□ 2.4
CTDNEP1-201ENST00000318988 CAPN2P17655 700 aa30.07■■■□□ 2.4
CTDNEP1-201ENST00000318988 LIG4P49917 911 aa30.07■■■□□ 2.4
CTDNEP1-201ENST00000318988 PTK7Q13308 1070 aa30.07■■■□□ 2.4
CTDNEP1-201ENST00000318988 TAS1R3Q7RTX0 852 aa30.07■■■□□ 2.4
CTDNEP1-201ENST00000318988 SRGAP1Q7Z6B7 1085 aa30.07■■■□□ 2.4
CTDNEP1-201ENST00000318988 IFNLR1Q8IU57 520 aaPredicted RBP30.07■■■□□ 2.4
CTDNEP1-201ENST00000318988 FAM114A1Q8IWE2 563 aa30.07■■■□□ 2.4
CTDNEP1-201ENST00000318988 IFT122Q9HBG6 1241 aa30.07■■■□□ 2.4
CTDNEP1-201ENST00000318988 CETN3O15182 167 aa30.06■■■□□ 2.4
CTDNEP1-201ENST00000318988 ADAM9Q13443 819 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms