RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 RFC5P40937 340 aa17.23■□□□□ 0.35
CALR-201ENST00000316448 SMTNP53814 917 aa17.23■□□□□ 0.35
CALR-201ENST00000316448 APBA1Q02410 837 aa17.23■□□□□ 0.35
CALR-201ENST00000316448 KCNH2Q12809 1159 aa17.23■□□□□ 0.35
CALR-201ENST00000316448 MEA1Q16626 185 aa17.23■□□□□ 0.35
CALR-201ENST00000316448 SLC9A9Q8IVB4 645 aa17.23■□□□□ 0.35
CALR-201ENST00000316448 MAP4K3Q8IVH8 894 aa17.23■□□□□ 0.35
CALR-201ENST00000316448 AGPAT5Q9NUQ2 364 aa17.23■□□□□ 0.35
CALR-201ENST00000316448 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.23■□□□□ 0.35
CALR-201ENST00000316448 IGKV6-21A0A0C4DH24 114 aa17.22■□□□□ 0.35
CALR-201ENST00000316448 SLC16A3O15427 465 aaKnown RBP17.22■□□□□ 0.35
CALR-201ENST00000316448 OLFML2BQ68BL8 750 aa17.22■□□□□ 0.35
CALR-201ENST00000316448 LRRC71Q8N4P6 559 aa17.22■□□□□ 0.35
CALR-201ENST00000316448 SLC7A3Q8WY07 619 aa17.22■□□□□ 0.35
CALR-201ENST00000316448 CAPNS2Q96L46 248 aa17.22■□□□□ 0.35
CALR-201ENST00000316448 GNEQ9Y223 722 aaKnown RBP17.22■□□□□ 0.35
CALR-201ENST00000316448 CTIFO43310 598 aaKnown RBP17.21■□□□□ 0.35
CALR-201ENST00000316448 EDN1P05305 212 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 PSMC2P35998 433 aaKnown RBP17.21■□□□□ 0.35
CALR-201ENST00000316448 ZBED6P86452 979 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 TNFAIP2Q03169 654 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 DEFB115Q30KQ5 88 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 DPY19L2P1Q6NXN4 242 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 WDR59Q6PJI9 974 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 SYT10Q6XYQ8 523 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 FAM186BQ8IYM0 893 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 RDH13Q8NBN7 331 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 OR6J1Q8NGC5 347 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 PRPF31Q8WWY3 499 aaKnown RBP17.21■□□□□ 0.35
CALR-201ENST00000316448 SLC35C1Q96A29 364 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 IFT74Q96LB3 600 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 CRACR2AQ9BSW2 395 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 GABRQQ9UN88 632 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 FANCGO15287 622 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 DYNC1LI2O43237 492 aaPredicted RBP17.21■□□□□ 0.35
CALR-201ENST00000316448 HBP1O60381 514 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 EPB41P11171 864 aaKnown RBP17.21■□□□□ 0.35
CALR-201ENST00000316448 HOXD8P13378 290 aaPredicted RBP17.21■□□□□ 0.35
CALR-201ENST00000316448 RGS2P41220 211 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 CAPSQ13938 189 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 C12orf56Q8IXR9 622 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 SLC17A8Q8NDX2 589 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 SUGCTQ9HAC7 445 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 TRPC6Q9Y210 931 aa17.21■□□□□ 0.35
CALR-201ENST00000316448 PPFIA4O75335 1185 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 NOL4O94818 638 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 TBC1D8O95759 1140 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 GJB1P08034 283 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 MMP3P08254 477 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 INSRRP14616 1297 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 CNGA1P29973 690 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 PSMC4P43686 418 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 SLC26A2P50443 739 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 NOGQ13253 232 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 MYBPC2Q14324 1141 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 GOLGA5Q8TBA6 731 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 PLEKHO2Q8TD55 490 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 TMEM174Q8WUU8 243 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 HVCN1Q96D96 273 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 PCMTD1Q96MG8 357 aaPredicted RBP17.2■□□□□ 0.34
CALR-201ENST00000316448 MKNK1Q9BUB5 465 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 MMRN2Q9H8L6 949 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 L2HGDHQ9H9P8 463 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 ERAP1Q9NZ08 941 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 HSPBP1Q9NZL4 362 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 FAM184BQ9ULE4 1060 aa17.2■□□□□ 0.34
CALR-201ENST00000316448 GOLGA8IPA6NC78 632 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 GOLGA8JA6NMD2 632 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 EXOC3O60645 756 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 NAMPTP43490 491 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 TRPV1Q8NER1 839 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 PPP1R13LQ8WUF5 828 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 APBA2Q99767 749 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 METTL14Q9HCE5 456 aaKnown RBP17.19■□□□□ 0.34
CALR-201ENST00000316448 FAM207AQ9NSI2 230 aaPredicted RBP17.19■□□□□ 0.34
CALR-201ENST00000316448 LRRIQ4A6NIV6 560 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 HNRNPH3P31942 346 aaKnown RBP17.19■□□□□ 0.34
CALR-201ENST00000316448 IGBP1P78318 339 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 CDK17Q00537 523 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 DCAF17Q5H9S7 520 aaPredicted RBP17.19■□□□□ 0.34
CALR-201ENST00000316448 IER5Q5VY09 327 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 SOCS4Q8WXH5 440 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 ZNF668Q96K58 619 aaPredicted RBP17.19■□□□□ 0.34
CALR-201ENST00000316448 CHP1Q99653 195 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 PPME1Q9Y570 386 aa17.19■□□□□ 0.34
CALR-201ENST00000316448 TTLL13PA6NNM8 815 aa17.18■□□□□ 0.34
CALR-201ENST00000316448 C22orf31O95567 290 aa17.18■□□□□ 0.34
CALR-201ENST00000316448 AFPP02771 609 aaKnown RBP17.18■□□□□ 0.34
CALR-201ENST00000316448 ADRB2P07550 413 aa17.18■□□□□ 0.34
CALR-201ENST00000316448 TRIM49P0CI25 452 aa17.18■□□□□ 0.34
CALR-201ENST00000316448 TRIM49CP0CI26 452 aa17.18■□□□□ 0.34
CALR-201ENST00000316448 XRCC5P13010 732 aaKnown RBP17.18■□□□□ 0.34
CALR-201ENST00000316448 DLG4P78352 724 aa17.18■□□□□ 0.34
CALR-201ENST00000316448 LACTBP83111 547 aaPredicted RBP17.18■□□□□ 0.34
CALR-201ENST00000316448 C1orf220Q5T0J3 134 aa17.18■□□□□ 0.34
CALR-201ENST00000316448 KCNN1Q92952 543 aa17.18■□□□□ 0.34
CALR-201ENST00000316448 HAPLN2Q9GZV7 340 aa17.18■□□□□ 0.34
CALR-201ENST00000316448 DNAI1Q9UI46 699 aa17.18■□□□□ 0.34
CALR-201ENST00000316448 EXOC7Q9UPT5 735 aa17.18■□□□□ 0.34
CALR-201ENST00000316448 H3BRB1 525 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms