RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 DHX58Q96C10 678 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 IFIH1Q9BYX4 1025 aaKnown RBP8.72□□□□□ -1.01
CDC42-201ENST00000315554 CCDC39Q9UFE4 941 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 PPME1Q9Y570 386 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.72□□□□□ -1.01
CDC42-201ENST00000315554 MORC2Q9Y6X9 1032 aaPredicted RBP8.72□□□□□ -1.01
CDC42-201ENST00000315554 TET1Q8NFU7 2136 aa8.72□□□□□ -1.01
CDC42-201ENST00000315554 A0A1B0GVL5 298 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 LRRIQ4A6NIV6 560 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 GRXCR1A8MXD5 290 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 HIP1RO75146 1068 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 RPS6KA5O75582 802 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 DARSP14868 501 aaKnown RBP8.71□□□□□ -1.01
CDC42-201ENST00000315554 BMP8BP34820 402 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 ARL2P36404 184 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 STAT6P42226 847 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 SLC12A3P55017 1021 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 DEFB103AP81534 67 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 PAK2Q13177 524 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 NAALADL2Q58DX5 795 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 PLEKHG4Q58EX7 1191 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 RESP18Q5W5W9 173 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 FAM117BQ6P1L5 589 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 CNKSR3Q6P9H4 555 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.71□□□□□ -1.012e-8■■■■■ 27.9
CDC42-201ENST00000315554 NYAP1Q6ZVC0 841 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 C1orf186Q6ZWK4 172 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 FAM228AQ86W67 206 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 EXOC8Q8IYI6 725 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 TDHQ8IZJ6 230 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 SYT2Q8N9I0 419 aaPredicted RBP8.71□□□□□ -1.01
CDC42-201ENST00000315554 MCPH1Q8NEM0 835 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 LARP4BQ92615 738 aaKnown RBP8.71□□□□□ -1.01
CDC42-201ENST00000315554 KIFC3Q9BVG8 833 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 TRAIPQ9BWF2 469 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 SCAND2PQ9GZW5 306 aaPredicted RBP8.71□□□□□ -1.01
CDC42-201ENST00000315554 MINDY3Q9H8M7 445 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 PADI3Q9ULW8 664 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 ST3GAL5Q9UNP4 418 aa8.71□□□□□ -1.01
CDC42-201ENST00000315554 GAS2O43903 313 aaKnown RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 MGEA5O60502 916 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 CLSTN1O94985 981 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 PARNO95453 639 aaKnown RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 RPLP2P05387 115 aaKnown RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 KRT18P05783 430 aaKnown RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 PFKMP08237 780 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 ACTN1P12814 892 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 PFKFB1P16118 471 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 EIF4BP23588 611 aaKnown RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 WDR5P61964 334 aaKnown RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 MAPK7Q13164 816 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 ARSHQ5FYA8 562 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 DYMQ7RTS9 669 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 DAW1Q8N136 415 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 LINC01599Q8WXQ3 324 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 HERVK_113Q902F9 699 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 GCOM2Q9BZD3 368 aaPredicted RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 TMX1Q9H3N1 280 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 GOLPH3LQ9H4A5 285 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 ZHX3Q9H4I2 956 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 IFT122Q9HBG6 1241 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 ERVK-5Q9HDB9 667 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 RYDENQ9NUL5 291 aaKnown RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 FAM13BQ9NYF5 915 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 USP20Q9Y2K6 914 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 CCDC169A6NNP5 214 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 INO80B-WBP1J3KQ70 363 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 SOX1O00570 391 aaPredicted RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 POLR2DO15514 142 aaKnown RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 SLC26A4O43511 780 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 UPP2O95045 317 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 CASP1P29466 404 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 KCNJ6P48051 423 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 RABGGTBP53611 331 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 PEX3P56589 373 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 IKBKEQ14164 716 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 TFDP1Q14186 410 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 MXD4Q14582 209 aaPredicted RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 E2F4Q16254 413 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 CCDC73Q6ZRK6 1079 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 CATSPER4Q7RTX7 472 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 RTN4RL1Q86UN2 441 aaPredicted RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 ZNF410Q86VK4 478 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 GRAMD1CQ8IYS0 662 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 MYOCDQ8IZQ8 938 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 ZNF454Q8N9F8 522 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 FSIP1Q8NA03 581 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 REEP2Q9BRK0 252 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 INO80BQ9C086 356 aaPredicted RBP8.7□□□□□ -1.02
CDC42-201ENST00000315554 STK17AQ9UEE5 414 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 SERTAD1Q9UHV2 236 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 KCNH3Q9ULD8 1083 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 SLC4A7Q9Y6M7 1214 aa8.7□□□□□ -1.02
CDC42-201ENST00000315554 ADGRA3Q8IWK6 1321 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 TRIOBPQ9H2D6 2365 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 MYMKA6NI61 221 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 GPR182O15218 404 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 SLC16A4O15374 487 aa8.69□□□□□ -1.02
CDC42-201ENST00000315554 ASAP2O43150 1006 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms