RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 OATP04181 439 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 DHX34Q14147 1143 aaKnown RBP14.73□□□□□ -0.05
SPAST-201ENST00000315285 RC3H1Q5TC82 1133 aaKnown RBP14.73□□□□□ -0.05
SPAST-201ENST00000315285 CCNI2Q6ZMN8 369 aaPredicted RBP14.73□□□□□ -0.05
SPAST-201ENST00000315285 FBXO41Q8TF61 875 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 MAML1Q92585 1016 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 FAF2Q96CS3 445 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 MAP3K14Q99558 947 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 TLK1Q9UKI8 766 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 TTC7AQ9ULT0 858 aaPredicted RBP14.73□□□□□ -0.05
SPAST-201ENST00000315285 UBE2Q2LH0YL09 131 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 DCTN3O75935 186 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 UCHL3P15374 230 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 ZNF18P17022 549 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 CNGA1P29973 690 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 C16orf86Q6ZW13 317 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 EPM2AIP1Q7L775 607 aaPredicted RBP14.72□□□□□ -0.05
SPAST-201ENST00000315285 AGPAT1Q99943 283 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 HERC5Q9UII4 1024 aaKnown RBP14.72□□□□□ -0.05
SPAST-201ENST00000315285 MAGED2Q9UNF1 606 aaPredicted RBP14.72□□□□□ -0.05
SPAST-201ENST00000315285 PFDN6O15212 129 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 CYP2C19P33261 490 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 TFDP2Q14188 446 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 TAF11Q15544 211 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 ZNF699Q32M78 642 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 REXO1L1PQ8IX06 675 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 HDAC11Q96DB2 347 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 FAM167AQ96KS9 214 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 TTC25Q96NG3 672 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 GOLGA8QA0A0J9YX86 632 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 GOLGA8OA6NCC3 632 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 GOLGA8NF8WBI6 632 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 PDHBP11177 359 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 TBXAS1P24557 533 aaPredicted RBP14.72□□□□□ -0.05
SPAST-201ENST00000315285 NKX1-1Q15270 411 aaPredicted RBP14.72□□□□□ -0.05
SPAST-201ENST00000315285 PPP6R3Q5H9R7 873 aaPredicted RBP14.72□□□□□ -0.05
SPAST-201ENST00000315285 ATG16L1Q676U5 607 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 SIX6OS1Q8N1H7 587 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 FBXL13Q8NEE6 735 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 FAM193BQ96PV7 902 aaPredicted RBP14.72□□□□□ -0.05
SPAST-201ENST00000315285 REEP2Q9BRK0 252 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 MLXIPLQ9NP71 852 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 HPSEQ9Y251 543 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 BRAFP15056 766 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 SWSAP1Q6NVH7 229 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 ENOSF1Q7L5Y1 443 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 DEPDC1BQ8WUY9 529 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 LCMT1Q9UIC8 334 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 STRIP2Q9ULQ0 834 aa14.72□□□□□ -0.05
SPAST-201ENST00000315285 GGPS1O95749 300 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 ANXA13P27216 316 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 SH3BGRP55822 239 aaPredicted RBP14.71□□□□□ -0.05
SPAST-201ENST00000315285 RBBP5Q15291 538 aaKnown RBP14.71□□□□□ -0.05
SPAST-201ENST00000315285 EDRF1Q3B7T1 1238 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 SLC27A3Q5K4L6 730 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 MCUQ8NE86 351 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 TTC17Q96AE7 1141 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 KLC2Q9H0B6 622 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 L2HGDHQ9H9P8 463 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 GNA15P30679 374 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 GUCY1A3Q02108 690 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 LDHDQ86WU2 507 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 NOA1Q8NC60 698 aaKnown RBP14.71□□□□□ -0.05
SPAST-201ENST00000315285 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.71□□□□□ -0.05
SPAST-201ENST00000315285 HVCN1Q96D96 273 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 A0A0G2JND7 137 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 A0A1W2PQJ5 194 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 DALRD3Q5D0E6 543 aaKnown RBP14.71□□□□□ -0.05
SPAST-201ENST00000315285 RHOT1Q8IXI2 618 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 MTRQ99707 1265 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 TRIM55Q9BYV6 548 aa14.71□□□□□ -0.05
SPAST-201ENST00000315285 Q3C1V9 767 aa14.71□□□□□ -0.06
SPAST-201ENST00000315285 DCLK2Q8N568 766 aa14.71□□□□□ -0.06
SPAST-201ENST00000315285 CHMP6Q96FZ7 201 aa14.71□□□□□ -0.06
SPAST-201ENST00000315285 STK33Q9BYT3 514 aa14.71□□□□□ -0.06
SPAST-201ENST00000315285 UBE4BO95155 1302 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 COPEO14579 308 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 CHUKO15111 745 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 TBX3O15119 743 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 MYBL1P10243 752 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 GALCP54803 685 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 JADE1Q6IE81 842 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 ZHX2Q9Y6X8 837 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 GOLGA8MH3BSY2 632 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 KLK7P49862 253 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 ARMCX2Q7L311 632 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 OR6B3Q8NGW1 331 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 C1orf54Q8WWF1 131 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 HOXC10Q9NYD6 342 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 FBXO40Q9UH90 709 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 PPP1R9AQ9ULJ8 1098 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 AP5Z1O43299 807 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 PPP1R37O75864 691 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 SPP2Q13103 211 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 NBPF9Q3BBW0 867 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 ZNF568Q3ZCX4 644 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 ZNF772Q68DY9 489 aaPredicted RBP14.7□□□□□ -0.06
SPAST-201ENST00000315285 BZW1Q7L1Q6 419 aaKnown RBP14.7□□□□□ -0.06
SPAST-201ENST00000315285 SNF8Q96H20 258 aa14.7□□□□□ -0.06
SPAST-201ENST00000315285 RBM12Q9NTZ6 932 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms