RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 AMHR2Q16671 573 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 RASIP1Q5U651 963 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 CDCA2Q69YH5 1023 aaPredicted RBP10.05□□□□□ -0.8
PDE4D-201ENST00000309641 PSRC1Q6PGN9 363 aaPredicted RBP10.05□□□□□ -0.8
PDE4D-201ENST00000309641 TDHQ8IZJ6 230 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 FMR1NBQ8N0W7 255 aaPredicted RBP10.05□□□□□ -0.8
PDE4D-201ENST00000309641 USP38Q8NB14 1042 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 HERVK_113Q902F9 699 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 SEPT8Q92599 483 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 HPS3Q969F9 1004 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 RNPC3Q96LT9 517 aaKnown RBP10.05□□□□□ -0.8
PDE4D-201ENST00000309641 DRC1Q96MC2 740 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 INO80BQ9C086 356 aaPredicted RBP10.05□□□□□ -0.8
PDE4D-201ENST00000309641 KCND2Q9NZV8 630 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 PTPRSQ13332 1948 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 MICAL3Q7RTP6 2002 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 GOLGA6L4A6NEF3 574 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 ENPP3O14638 875 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 PFKMP08237 780 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 PRR29P0C7W0 189 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 PLS3P13797 630 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 IDEP14735 1019 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 PHKA2P46019 1235 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 CDC42EP1Q00587 391 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 IKBKEQ14164 716 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 TFDP1Q14186 410 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 DSC3Q14574 896 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 ODR4Q5SWX8 454 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 SFR1Q86XK3 245 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 IFNLR1Q8IU57 520 aaPredicted RBP10.04□□□□□ -0.8
PDE4D-201ENST00000309641 MYCT1Q8N699 235 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 GLIS3Q8NEA6 775 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 DEPTORQ8TB45 409 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 PAGE5Q96GU1 130 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 CPB2Q96IY4 423 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 IFT74Q96LB3 600 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 ADAM2Q99965 735 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 CCDC113Q9H0I3 377 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 TNMDQ9H2S6 317 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 TBC1D7Q9P0N9 293 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 ODF2LQ9ULJ1 636 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 EYSQ5T1H1 3165 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 GPR182O15218 404 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 TSPAN1O60635 241 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 FAM13AO94988 1023 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 NMT1P30419 496 aaKnown RBP10.04□□□□□ -0.8
PDE4D-201ENST00000309641 POU5F1BQ06416 359 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 DMP1Q13316 513 aaPredicted RBP10.04□□□□□ -0.8
PDE4D-201ENST00000309641 FAM117BQ6P1L5 589 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 KRBA2Q6ZNG9 492 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 CATSPER4Q7RTX7 472 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 SRGAP1Q7Z6B7 1085 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 CEP57L1Q8IYX8 460 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 TMEM161BQ8NDZ6 487 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 ERCC4Q92889 916 aaPredicted RBP10.04□□□□□ -0.8
PDE4D-201ENST00000309641 NTPCRQ9BSD7 190 aaKnown RBP10.04□□□□□ -0.8
PDE4D-201ENST00000309641 TIPINQ9BVW5 301 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 NFKBIZQ9BYH8 718 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 IKZF4Q9H2S9 585 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 CUEDC2Q9H467 287 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 PARVGQ9HBI0 331 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 KMT5AQ9NQR1 393 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 ARHGAP28Q9P2N2 729 aa10.04□□□□□ -0.8
PDE4D-201ENST00000309641 PIN4Q9Y237 131 aaKnown RBP10.04□□□□□ -0.8
PDE4D-201ENST00000309641 ABHD14A-ACY1A0A1B0GW23 586 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 UPP2O95045 317 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 ARF4P18085 180 aaPredicted RBP10.03□□□□□ -0.8
PDE4D-201ENST00000309641 CASP5P51878 434 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 PPP2R5AQ15172 486 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 ZC2HC1CQ53FD0 456 aaPredicted RBP10.03□□□□□ -0.8
PDE4D-201ENST00000309641 MYOCDQ8IZQ8 938 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 CNNM3Q8NE01 707 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 APBB2Q92870 758 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 C7orf25Q9BPX7 421 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
PDE4D-201ENST00000309641 FZD8Q9H461 694 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 LMBRD1Q9NUN5 540 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 AGPAT5Q9NUQ2 364 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 PANK4Q9NVE7 773 aa10.03□□□□□ -0.8
PDE4D-201ENST00000309641 FRMD3A2A2Y4 597 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 DENND3A2RUS2 1198 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 MEIS3P2A8K0S8 358 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 TRAK2O60296 914 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 TBCAO75347 108 aaKnown RBP10.02□□□□□ -0.8
PDE4D-201ENST00000309641 PRKCBP05771 671 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 ACTN1P12814 892 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 MYOGP15173 224 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 SFPQP23246 707 aaKnown RBP eCLIP10.02□□□□□ -0.8
PDE4D-201ENST00000309641 RABGGTBP53611 331 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 NCKAP1LP55160 1127 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 ASIC1P78348 528 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 FAM160A1Q05DH4 1040 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 KCNA1Q09470 495 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 NT5DC1Q5TFE4 455 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 HAUS6Q7Z4H7 955 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 ZBTB8OSQ8IWT0 167 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 SPIRE2Q8WWL2 714 aa10.02□□□□□ -0.8
PDE4D-201ENST00000309641 EIF2AQ9BY44 585 aaKnown RBP10.02□□□□□ -0.8
PDE4D-201ENST00000309641 LARSQ9P2J5 1176 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms