RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ZNF76P36508 570 aa13.4□□□□□ -0.26
SMIM4-201ENST00000307106 HDAC1Q13547 482 aaPredicted RBP13.4□□□□□ -0.26
SMIM4-201ENST00000307106 ELMSAN1Q6PJG2 1045 aa13.4□□□□□ -0.26
SMIM4-201ENST00000307106 HEATR3Q7Z4Q2 680 aa13.4□□□□□ -0.26
SMIM4-201ENST00000307106 PLEKHM2Q8IWE5 1019 aa13.4□□□□□ -0.26
SMIM4-201ENST00000307106 SMG7Q92540 1137 aaKnown RBP13.4□□□□□ -0.26
SMIM4-201ENST00000307106 EPC1Q9H2F5 836 aa13.4□□□□□ -0.26
SMIM4-201ENST00000307106 LY9Q9HBG7 655 aa13.4□□□□□ -0.26
SMIM4-201ENST00000307106 DPP7Q9UHL4 492 aa13.4□□□□□ -0.26
SMIM4-201ENST00000307106 TAF6LQ9Y6J9 622 aa13.4□□□□□ -0.26
SMIM4-201ENST00000307106 NUMBLQ9Y6R0 609 aa13.4□□□□□ -0.26
SMIM4-201ENST00000307106 KANSL1LA0AUZ9 987 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 MEIS3P2A8K0S8 358 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 ANHXE9PGG2 379 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 C2CD2LO14523 706 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 DHX15O43143 795 aaKnown RBP13.39□□□□□ -0.27
SMIM4-201ENST00000307106 B4GALT3O60512 393 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 CSDE1O75534 798 aaKnown RBP13.39□□□□□ -0.27
SMIM4-201ENST00000307106 OFD1O75665 1012 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 RFPL2O75678 378 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 ADH1AP07327 375 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 RXRAP19793 462 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 CSTF1Q05048 431 aaKnown RBP13.39□□□□□ -0.27
SMIM4-201ENST00000307106 HTR4Q13639 388 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 TWF2Q6IBS0 349 aaKnown RBP13.39□□□□□ -0.27
SMIM4-201ENST00000307106 GET4Q7L5D6 327 aaPredicted RBP13.39□□□□□ -0.27
SMIM4-201ENST00000307106 NIPA1Q7RTP0 329 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 ZNF280BQ86YH2 543 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 CCDC82Q8N4S0 544 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 ZBTB44Q8NCP5 570 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 ST13P5Q8NFI4 369 aaPredicted RBP13.39□□□□□ -0.27
SMIM4-201ENST00000307106 NLRP7Q8WX94 980 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 TRAIPQ9BWF2 469 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 ANO3Q9BYT9 981 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 PIDD1Q9HB75 910 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 CHST12Q9NRB3 414 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMIM4-201ENST00000307106 RALYQ9UKM9 306 aaKnown RBP13.39□□□□□ -0.27
SMIM4-201ENST00000307106 NOTCH4Q99466 2003 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 GREB1Q4ZG55 1949 aa13.39□□□□□ -0.27
SMIM4-201ENST00000307106 PDCD11Q14690 1871 aaKnown RBP13.38□□□□□ -0.27
SMIM4-201ENST00000307106 FAM208BQ5VWN6 2430 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 IPO5O00410 1097 aaKnown RBP13.38□□□□□ -0.27
SMIM4-201ENST00000307106 LILRB5O75023 590 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 GLUD1P00367 558 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 FOSP01100 380 aaPredicted RBP13.38□□□□□ -0.27
SMIM4-201ENST00000307106 URODP06132 367 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 SKIP12755 728 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 TGM1P22735 817 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 AK2P54819 239 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 SNW1Q13573 536 aaKnown RBP13.38□□□□□ -0.27
SMIM4-201ENST00000307106 PPM1JQ5JR12 505 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 B4GALNT3Q6L9W6 998 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 PLA2G4DQ86XP0 818 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 MB21D2Q8IYB1 491 aaPredicted RBP13.38□□□□□ -0.27
SMIM4-201ENST00000307106 FAM167AQ96KS9 214 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 RPS6KC1Q96S38 1066 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 FAM105AQ9NUU6 356 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 ZSCAN32Q9NX65 697 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 GABBR1Q9UBS5 961 aa13.38□□□□□ -0.27
SMIM4-201ENST00000307106 FAM86B1E9PN63 330 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 TEX28O15482 410 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 DDHD2O94830 711 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 SOD2P04179 222 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 ALDH2P05091 517 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 PSAPP07602 524 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 FAM86B2P0C5J1 330 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 SREBF1P36956 1147 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 GPC5P78333 572 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 UBXN2BQ14CS0 331 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 ZNF746Q6NUN9 644 aaPredicted RBP13.37□□□□□ -0.27
SMIM4-201ENST00000307106 NFXL1Q6ZNB6 911 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 SMAP1Q8IYB5 467 aaPredicted RBP13.37□□□□□ -0.27
SMIM4-201ENST00000307106 URGCPQ8TCY9 931 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 ZNF707Q96C28 371 aaPredicted RBP13.37□□□□□ -0.27
SMIM4-201ENST00000307106 RPP25Q9BUL9 199 aaKnown RBP13.37□□□□□ -0.27
SMIM4-201ENST00000307106 DDX23Q9BUQ8 820 aaKnown RBP13.37□□□□□ -0.27
SMIM4-201ENST00000307106 GCOM2Q9BZD3 368 aaPredicted RBP13.37□□□□□ -0.27
SMIM4-201ENST00000307106 PARD6AQ9NPB6 346 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 RIC8AQ9NPQ8 531 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 TCEAL9Q9UHQ7 104 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 GMEB2Q9UKD1 530 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 PIN4Q9Y237 131 aaKnown RBP13.37□□□□□ -0.27
SMIM4-201ENST00000307106 SSX2IPQ9Y2D8 614 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 FAN1Q9Y2M0 1017 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 MTF2Q9Y483 593 aaPredicted RBP13.37□□□□□ -0.27
SMIM4-201ENST00000307106 PCDHA10Q9Y5I2 948 aa13.37□□□□□ -0.27
SMIM4-201ENST00000307106 IGLV3-22A0A075B6J6 115 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 CCDC69A6NI79 296 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 TBC1D4O60343 1298 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 SPATA31D3P0C874 917 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMIM4-201ENST00000307106 MAGEA9P43362 315 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 RAB27AP51159 221 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 NAPAP54920 295 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 PTH1RQ03431 593 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 COL9A2Q14055 689 aaPredicted RBP13.36□□□□□ -0.27
SMIM4-201ENST00000307106 MLF2Q15773 248 aaPredicted RBP13.36□□□□□ -0.27
SMIM4-201ENST00000307106 WWC2Q6AWC2 1192 aa13.36□□□□□ -0.27
SMIM4-201ENST00000307106 TYW1BQ6NUM6 668 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms