RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 CNOT8Q9UFF9 292 aaKnown RBP13.02□□□□□ -0.33
PDGFD-201ENST00000302251 SALL4Q9UJQ4 1053 aa13.02□□□□□ -0.33
PDGFD-201ENST00000302251 ATP6V1G2O95670 118 aa13.02□□□□□ -0.33
PDGFD-201ENST00000302251 COG7P83436 770 aa13.02□□□□□ -0.33
PDGFD-201ENST00000302251 DNAJC3Q13217 504 aa13.02□□□□□ -0.33
PDGFD-201ENST00000302251 LRRC36Q1X8D7 754 aa13.02□□□□□ -0.33
PDGFD-201ENST00000302251 NAALADL2Q58DX5 795 aa13.02□□□□□ -0.33
PDGFD-201ENST00000302251 MEI1Q5TIA1 1274 aa13.02□□□□□ -0.33
PDGFD-201ENST00000302251 SYNGAP1Q96PV0 1343 aa13.02□□□□□ -0.33
PDGFD-201ENST00000302251 HSPA6P17066 643 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 CHRNA3P32297 505 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 CASP4P49662 377 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 CERKLQ49MI3 558 aaPredicted RBP13.01□□□□□ -0.33
PDGFD-201ENST00000302251 XKR9Q5GH70 373 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 POMGNT1Q8WZA1 660 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 ZNF512BQ96KM6 892 aaPredicted RBP13.01□□□□□ -0.33
PDGFD-201ENST00000302251 DHX36Q9H2U1 1008 aaKnown RBP13.01□□□□□ -0.33
PDGFD-201ENST00000302251 IRAK4Q9NWZ3 460 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 PFDN1O60925 122 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 KRT17Q04695 432 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 ICA1Q05084 483 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 SPARCL1Q14515 664 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 CRYMQ14894 314 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 SEPT2Q15019 361 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 APTXQ7Z2E3 356 aaKnown RBP13.01□□□□□ -0.33
PDGFD-201ENST00000302251 FBXO41Q8TF61 875 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 NUP85Q9BW27 656 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 SPZ1Q9BXG8 430 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 UBXN6Q9BZV1 441 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 VCX3BQ9H321 246 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 ZFP69BQ9UJL9 534 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 UPP2O95045 317 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 TARSP26639 723 aaKnown RBP13.01□□□□□ -0.33
PDGFD-201ENST00000302251 SOX5P35711 763 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 FIGNQ5HY92 759 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 TRAPPC3LQ5T215 181 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 SWT1Q5T5J6 900 aaKnown RBP13.01□□□□□ -0.33
PDGFD-201ENST00000302251 BTBD6Q96KE9 485 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 C8orf37Q96NL8 207 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 NT5C1BQ96P26 610 aa13.01□□□□□ -0.33
PDGFD-201ENST00000302251 KLF6Q99612 283 aaPredicted RBP13.01□□□□□ -0.33
PDGFD-201ENST00000302251 PABPC3Q9H361 631 aaKnown RBP13.01□□□□□ -0.33
PDGFD-201ENST00000302251 CCNL1Q9UK58 526 aaPredicted RBP13.01□□□□□ -0.33
PDGFD-201ENST00000302251 G3BP2Q9UN86 482 aaKnown RBP13.01□□□□□ -0.33
PDGFD-201ENST00000302251 AGTP01019 485 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 KITP10721 976 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 SYCP2LQ5T4T6 812 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 CEP128Q6ZU80 1094 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 IQCKQ8N0W5 287 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 MIEF2Q96C03 454 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 THAP2Q9H0W7 228 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 DLGAP2Q9P1A6 1054 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 FRMD4AQ9P2Q2 1039 aaPredicted RBP13□□□□□ -0.33
PDGFD-201ENST00000302251 FAM187AA6NFU0 413 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 TRAPPC3O43617 180 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 ITGB3BPQ13352 177 aaPredicted RBP13□□□□□ -0.33
PDGFD-201ENST00000302251 PPP2R5CQ13362 524 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 ADGRF4Q8IZF3 695 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 GADD45GIP1Q8TAE8 222 aaPredicted RBP13□□□□□ -0.33
PDGFD-201ENST00000302251 ZNF564Q8TBZ8 553 aaPredicted RBP13□□□□□ -0.33
PDGFD-201ENST00000302251 ABTB1Q969K4 478 aaPredicted RBP13□□□□□ -0.33
PDGFD-201ENST00000302251 C1orf112Q9NSG2 853 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 KLHL11Q9NVR0 708 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
PDGFD-201ENST00000302251 CASZ1Q86V15 1759 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 FLT3P36888 993 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 PSMC4P43686 418 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 MFAP3P55082 362 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 BASP1P80723 227 aaKnown RBP13□□□□□ -0.33
PDGFD-201ENST00000302251 SMAD1Q15797 465 aaKnown RBP13□□□□□ -0.33
PDGFD-201ENST00000302251 EPC2Q52LR7 807 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 MDH1BQ5I0G3 518 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 GPATCH4Q5T3I0 446 aaKnown RBP13□□□□□ -0.33
PDGFD-201ENST00000302251 SLC30A10Q6XR72 485 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 RIOK1Q9BRS2 568 aaKnown RBP13□□□□□ -0.33
PDGFD-201ENST00000302251 MAD1L1Q9Y6D9 718 aa13□□□□□ -0.33
PDGFD-201ENST00000302251 DCDC2CA8MYV0 355 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 MAP3K7O43318 606 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 KCNQ2O43526 872 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 STAMBPO95630 424 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 NQO1P15559 274 aaKnown RBP12.99□□□□□ -0.33
PDGFD-201ENST00000302251 COMTP21964 271 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 RANBP1P43487 201 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 C2CD6Q53TS8 623 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 MIIPQ5JXC2 388 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
PDGFD-201ENST00000302251 TMEM154Q6P9G4 183 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 GSDMBQ8TAX9 411 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 REEP2Q9BRK0 252 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 ABCF3Q9NUQ8 709 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 HAO1Q9UJM8 370 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 MIF4GDA9UHW6 222 aaKnown RBP12.99□□□□□ -0.33
PDGFD-201ENST00000302251 F8VZ95 297 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 CYP26A1O43174 497 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 ARHGAP4P98171 946 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 ITIH3Q06033 890 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 RASA3Q14644 834 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 ZNF394Q53GI3 561 aa12.99□□□□□ -0.33
PDGFD-201ENST00000302251 SLC30A9Q6PML9 568 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms