RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 ZDHHC9Q9Y397 364 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 SRPRBQ9Y5M8 271 aaKnown RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 MRPL42Q9Y6G3 142 aaKnown RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 MEIS3P2A8K0S8 358 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 TSPAN1O60635 241 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 STAG3L1P0CL83 205 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 PLCG1P19174 1290 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 HOXA11P31270 313 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 NASPP49321 788 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 ERVK-21P61565 698 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 TFDP1Q14186 410 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 DHX8Q14562 1220 aaKnown RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 AMHR2Q16671 573 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 RINT1Q6NUQ1 792 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 CDR2LQ86X02 465 aaPredicted RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 FIBCD1Q8N539 461 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 SYMPKQ92797 1274 aaKnown RBP20.19■□□□□ 0.82
SPSB3-201ENST00000301717 LPPQ93052 612 aa20.19■□□□□ 0.82
SPSB3-201ENST00000301717 TTLL13PA6NNM8 815 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 HIP1RO75146 1068 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 EDN1P05305 212 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 PLA2G4BP0C869 781 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 LIG1P18858 919 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 SLC12A3P55017 1021 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 MAPK7Q13164 816 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 STK38Q15208 465 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 C1orf186Q6ZWK4 172 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 LINC00301Q8NCQ3 95 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 RASSF8Q8NHQ8 419 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 BLOC1S4Q9NUP1 217 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 TMEM161AQ9NX61 479 aa20.18■□□□□ 0.82
SPSB3-201ENST00000301717 SPTBN5Q9NRC6 3674 aaKnown RBP20.17■□□□□ 0.82
SPSB3-201ENST00000301717 TBKBP1A7MCY6 615 aa20.17■□□□□ 0.82
SPSB3-201ENST00000301717 SFI1A8K8P3 1242 aa20.17■□□□□ 0.82
SPSB3-201ENST00000301717 LPXNO60711 386 aa20.17■□□□□ 0.82
SPSB3-201ENST00000301717 EPC2Q52LR7 807 aa20.17■□□□□ 0.82
SPSB3-201ENST00000301717 CLLU1OSQ5K130 101 aa20.17■□□□□ 0.82
SPSB3-201ENST00000301717 UBXN11Q5T124 520 aa20.17■□□□□ 0.82
SPSB3-201ENST00000301717 MICALL1Q8N3F8 863 aa20.17■□□□□ 0.82
SPSB3-201ENST00000301717 PPM1EQ8WY54 764 aa20.17■□□□□ 0.82
SPSB3-201ENST00000301717 CALML4Q96GE6 196 aa20.17■□□□□ 0.82
SPSB3-201ENST00000301717 GAS2L1Q99501 681 aaPredicted RBP20.17■□□□□ 0.82
SPSB3-201ENST00000301717 A0A0U1RQF3 1178 aa20.16■□□□□ 0.82
SPSB3-201ENST00000301717 ERLIN2O94905 339 aa20.16■□□□□ 0.82
SPSB3-201ENST00000301717 DNM1Q05193 864 aaKnown RBP20.16■□□□□ 0.82
SPSB3-201ENST00000301717 MCM6Q14566 821 aa20.16■□□□□ 0.82
SPSB3-201ENST00000301717 ARSHQ5FYA8 562 aa20.16■□□□□ 0.82
SPSB3-201ENST00000301717 ZNF598Q86UK7 904 aaKnown RBP20.16■□□□□ 0.82
SPSB3-201ENST00000301717 IFNLR1Q8IU57 520 aaPredicted RBP20.16■□□□□ 0.82
SPSB3-201ENST00000301717 TMEM192Q8IY95 271 aa20.16■□□□□ 0.82
SPSB3-201ENST00000301717 SYT2Q8N9I0 419 aaPredicted RBP20.16■□□□□ 0.82
SPSB3-201ENST00000301717 ZNF396Q96N95 335 aaPredicted RBP20.16■□□□□ 0.82
SPSB3-201ENST00000301717 EIF2AQ9BY44 585 aaKnown RBP20.16■□□□□ 0.82
SPSB3-201ENST00000301717 PANK2Q9BZ23 570 aa20.16■□□□□ 0.82
SPSB3-201ENST00000301717 NT5C3AQ9H0P0 336 aa20.16■□□□□ 0.82
SPSB3-201ENST00000301717 CHST12Q9NRB3 414 aa20.16■□□□□ 0.82
SPSB3-201ENST00000301717 FAM105AQ9NUU6 356 aa20.16■□□□□ 0.82
SPSB3-201ENST00000301717 DACT1Q9NYF0 836 aa20.16■□□□□ 0.82
SPSB3-201ENST00000301717 SPTLC2O15270 562 aa20.15■□□□□ 0.82
SPSB3-201ENST00000301717 CSPG5O95196 566 aa20.15■□□□□ 0.82
SPSB3-201ENST00000301717 BRD1O95696 1058 aa20.15■□□□□ 0.82
SPSB3-201ENST00000301717 CTNNB1P35222 781 aa20.15■□□□□ 0.82
SPSB3-201ENST00000301717 PEX3P56589 373 aa20.15■□□□□ 0.82
SPSB3-201ENST00000301717 CCDC85BQ15834 202 aaPredicted RBP20.15■□□□□ 0.82
SPSB3-201ENST00000301717 CDCA2Q69YH5 1023 aaPredicted RBP20.15■□□□□ 0.82
SPSB3-201ENST00000301717 CMTR2Q8IYT2 770 aaKnown RBP20.15■□□□□ 0.82
SPSB3-201ENST00000301717 KRI1Q8N9T8 703 aaKnown RBP20.15■□□□□ 0.82
SPSB3-201ENST00000301717 FBXO22Q8NEZ5 403 aa20.15■□□□□ 0.82
SPSB3-201ENST00000301717 MAFAQ8NHW3 353 aaPredicted RBP20.15■□□□□ 0.82
SPSB3-201ENST00000301717 ELAC1Q9H777 363 aaKnown RBP20.15■□□□□ 0.82
SPSB3-201ENST00000301717 REV3LO60673 3130 aa20.15■□□□□ 0.82
SPSB3-201ENST00000301717 A0A087X0B3 334 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 ARF4P18085 180 aaPredicted RBP20.14■□□□□ 0.81
SPSB3-201ENST00000301717 NAMPTP43490 491 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 POU5F1BQ06416 359 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 BECN1Q14457 450 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 DEPTORQ8TB45 409 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 HELQQ8TDG4 1101 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 RAD54LQ92698 747 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 KIFAP3Q92845 792 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 CASD1Q96PB1 797 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 NFKBIZQ9BYH8 718 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 CCSER1Q9C0I3 900 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 HES2Q9Y543 173 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 PCDHB2Q9Y5E7 798 aa20.14■□□□□ 0.81
SPSB3-201ENST00000301717 COL4A4P53420 1690 aaPredicted RBP20.14■□□□□ 0.81
SPSB3-201ENST00000301717 NPTX2P47972 431 aa20.13■□□□□ 0.81
SPSB3-201ENST00000301717 LRRC55Q6ZSA7 311 aa20.13■□□□□ 0.81
SPSB3-201ENST00000301717 GPBP1Q86WP2 473 aa20.13■□□□□ 0.81
SPSB3-201ENST00000301717 CLP1Q92989 425 aaKnown RBP20.13■□□□□ 0.81
SPSB3-201ENST00000301717 CCDC113Q9H0I3 377 aa20.13■□□□□ 0.81
SPSB3-201ENST00000301717 RNF39Q9H2S5 420 aa20.13■□□□□ 0.81
SPSB3-201ENST00000301717 TYW1Q9NV66 732 aaKnown RBP20.13■□□□□ 0.81
SPSB3-201ENST00000301717 MTCH2Q9Y6C9 303 aa20.13■□□□□ 0.81
SPSB3-201ENST00000301717 PRRC2BQ5JSZ5 2229 aaKnown RBP20.13■□□□□ 0.81
SPSB3-201ENST00000301717 MYH15Q9Y2K3 1946 aa20.13■□□□□ 0.81
SPSB3-201ENST00000301717 UNC80Q8N2C7 3258 aa20.12■□□□□ 0.81
SPSB3-201ENST00000301717 CCDC169A6NNP5 214 aa20.12■□□□□ 0.81
SPSB3-201ENST00000301717 GUCY2CP25092 1073 aa20.12■□□□□ 0.81
SPSB3-201ENST00000301717 PBX3P40426 434 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms