RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 USP27XA6NNY8 438 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 TNPO2O14787 897 aaKnown RBP17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 PPFIA4O75335 1185 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 LGALS2P05162 132 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 GLRA2P23416 452 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 RGS2P41220 211 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 NOGQ13253 232 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 GJC2Q5T442 439 aaPredicted RBP17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 CACNA2D4Q7Z3S7 1137 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 ASAP3Q8TDY4 903 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 AFG1LQ8WV93 481 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 BICD1Q96G01 975 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 CBWD1Q9BRT8 395 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 PCIF1Q9H4Z3 704 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 ADGRA3Q8IWK6 1321 aa17.17■□□□□ 0.34
HERPUD1-201ENST00000300302 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 GTPBP10A4D1E9 387 aaKnown RBP17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 LRRIQ4A6NIV6 560 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 HNRNPDLO14979 420 aaKnown RBP17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 CA12O43570 354 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 ALDH1A1P00352 501 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 SMPD1P17405 629 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 BFSP1Q12934 665 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 MXD4Q14582 209 aaPredicted RBP17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 USP6NLQ92738 828 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 PPP1R13BQ96KQ4 1090 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 C16orf45Q96MC5 204 aaPredicted RBP17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 LSM14BQ9BX40 385 aaKnown RBP17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 NUCKS1Q9H1E3 243 aaKnown RBP17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 CEP72Q9P209 647 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 ZNF215Q9UL58 517 aaPredicted RBP17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 GOLGA6L9A6NEM1 432 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 ZBTB42B2RXF5 422 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 TISP43B9A030 160 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 TNFAIP2Q03169 654 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 PTPN14Q15678 1187 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 MEA1Q16626 185 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 EXOC3L4Q17RC7 722 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 ZNF484Q5JVG2 852 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 OLFML2BQ68BL8 750 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 GBP6Q6ZN66 633 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 RDH13Q8NBN7 331 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 OR6J1Q8NGC5 347 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 PSPC1Q8WXF1 523 aaKnown RBP17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 APBA2Q99767 749 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 CRACR2AQ9BSW2 395 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 PPP2R2CQ9Y2T4 447 aa17.16■□□□□ 0.34
HERPUD1-201ENST00000300302 IGKV6-21A0A0C4DH24 114 aa17.15■□□□□ 0.34
HERPUD1-201ENST00000300302 K7ERI5 159 aa17.15■□□□□ 0.34
HERPUD1-201ENST00000300302 KIF2AO00139 706 aaPredicted RBP17.15■□□□□ 0.34
HERPUD1-201ENST00000300302 CCDC175P0C221 793 aa17.15■□□□□ 0.34
HERPUD1-201ENST00000300302 GARTP22102 1010 aa17.15■□□□□ 0.34
HERPUD1-201ENST00000300302 RAD9BQ6WBX8 426 aa17.15■□□□□ 0.34
HERPUD1-201ENST00000300302 TOGARAM2Q6ZUX3 1019 aa17.15■□□□□ 0.34
HERPUD1-201ENST00000300302 TMEM134Q9H6X4 195 aa17.15■□□□□ 0.34
HERPUD1-201ENST00000300302 SUGCTQ9HAC7 445 aa17.15■□□□□ 0.34
HERPUD1-201ENST00000300302 PLCB1Q9NQ66 1216 aa17.15■□□□□ 0.34
HERPUD1-201ENST00000300302 ANKRD63C9JTQ0 380 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 EPHB6O15197 1021 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 HNRNPH3P31942 346 aaKnown RBP17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 LIG4P49917 911 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 EFNA5P52803 228 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 CDK17Q00537 523 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 HSP90AA2PQ14568 343 aaPredicted RBP17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 DGKDQ16760 1214 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 PRPF31Q8WWY3 499 aaKnown RBP17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 POMGNT1Q8WZA1 660 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 PLAGL2Q9UPG8 496 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 PHLPP2Q6ZVD8 1323 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 ADCY3O60266 1144 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 TUBB4AP04350 444 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 CYP2B6P20813 491 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 ADSSP30520 456 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 FMO5P49326 533 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 VAMP7P51809 220 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 CAPSQ13938 189 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 MTF1Q14872 753 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 NYAP1Q6ZVC0 841 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 RRAGAQ7L523 313 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 TAS1R3Q7RTX0 852 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 RNPEPQ9H4A4 650 aa17.14■□□□□ 0.33
HERPUD1-201ENST00000300302 COL1A2P08123 1366 aa17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 H3BRB1 525 aa17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 KIAA0391O15091 583 aaKnown RBP17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 N4BP1O75113 896 aaKnown RBP17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 MMP3P08254 477 aa17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 HOXD8P13378 290 aaPredicted RBP17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 TNNT1P13805 278 aa17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 SNRNP35Q16560 246 aaKnown RBP17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 WDR59Q6PJI9 974 aa17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 USP37Q86T82 979 aa17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 REM2Q8IYK8 340 aaPredicted RBP17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 C16orf70Q9BSU1 422 aa17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 TUT1Q9H6E5 874 aaKnown RBP17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 FLRT1Q9NZU1 646 aa17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 GCNT4Q9P109 453 aa17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 GJD2Q9UKL4 321 aa17.13■□□□□ 0.33
HERPUD1-201ENST00000300302 LRRC53A6NM62 1247 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 MAGEB2O15479 319 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 NOL4O94818 638 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms