RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 ARHGAP44Q17R89 818 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 FAM43BQ6ZT52 329 aaPredicted RBP14.02□□□□□ -0.17
TVP23A-201ENST00000299866 PALB2Q86YC2 1186 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 NUDCD1Q96RS6 583 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 EYA3Q99504 573 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 LBHD1Q9BQE6 289 aaPredicted RBP14.02□□□□□ -0.17
TVP23A-201ENST00000299866 ZCWPW1Q9H0M4 648 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 TAOK3Q9H2K8 898 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 IKZF4Q9H2S9 585 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 CDC42EP4Q9H3Q1 356 aaKnown RBP14.02□□□□□ -0.17
TVP23A-201ENST00000299866 BCAS3Q9H6U6 928 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 USP40Q9NVE5 1235 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 CTTNBP2NLQ9P2B4 639 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 PARP2Q9UGN5 583 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 DIS3Q9Y2L1 958 aaKnown RBP14.02□□□□□ -0.17
TVP23A-201ENST00000299866 POTEFA5A3E0 1075 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 O00370 1275 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 UNC5CO95185 931 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 POTEIP0CG38 1075 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 CHRNA3P32297 505 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 JAM2P57087 298 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 ORC2Q13416 577 aaPredicted RBP14.02□□□□□ -0.17
TVP23A-201ENST00000299866 CTTNQ14247 550 aaKnown RBP14.02□□□□□ -0.17
TVP23A-201ENST00000299866 DRAP1Q14919 205 aaPredicted RBP14.02□□□□□ -0.17
TVP23A-201ENST00000299866 CGB2Q6NT52 195 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 ZNF449Q6P9G9 518 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 POTEGQ6S5H5 508 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 POTEEQ6S8J3 1075 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 FBXO33Q7Z6M2 555 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 SFR1Q86XK3 245 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 TEX9Q8N6V9 391 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 CNBD1Q8NA66 436 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 ANKLE1Q8NAG6 615 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 SYT15Q9BQS2 421 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 RNPEPL1Q9HAU8 725 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 GPCPD1Q9NPB8 672 aa14.02□□□□□ -0.17
TVP23A-201ENST00000299866 ANKRD33BA6NCL7 494 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 PODXLO00592 558 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 LMNB1P20700 586 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 SESN3P58005 492 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 KNOP1Q1ED39 458 aaKnown RBP14.01□□□□□ -0.17
TVP23A-201ENST00000299866 TMEM154Q6P9G4 183 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 LONP2Q86WA8 852 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 PIGOQ8TEQ8 1089 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 ERP27Q96DN0 273 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 TMEM109Q9BVC6 243 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 MYLK2Q9H1R3 596 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 PAPPAQ13219 1627 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 A0A1B0GUL6 1792 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 NUP98P52948 1817 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 CALB2P22676 271 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 CALCOCO2Q13137 446 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 PABPC4Q13310 644 aaKnown RBP eCLIP14.01□□□□□ -0.17
TVP23A-201ENST00000299866 ARSHQ5FYA8 562 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 TNFAIP8L3Q5GJ75 292 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 PITPNM3Q9BZ71 974 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 NT5C3AQ9H0P0 336 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 PRKAG3Q9UGI9 489 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 DNAJC12Q9UKB3 198 aa14.01□□□□□ -0.17
TVP23A-201ENST00000299866 GNAZP19086 355 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 SOX5P35711 763 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 CCNG1P51959 295 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 EIF6P56537 245 aaKnown RBP14□□□□□ -0.17
TVP23A-201ENST00000299866 KCNA1Q09470 495 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 MESDQ14696 234 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 ERFEQ4G0M1 354 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 PARP10Q53GL7 1025 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 BICDL1Q6ZP65 573 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 SRRM1Q8IYB3 904 aaKnown RBP14□□□□□ -0.17
TVP23A-201ENST00000299866 SLC30A5Q8TAD4 765 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 SLC35C1Q96A29 364 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 RUNDC3BQ96NL0 473 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 COL4A1P02462 1669 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 IRF6O14896 467 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 PEX11AO75192 247 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 LRRN2O75325 713 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 NR3C1P04150 777 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 HOXA7P31268 230 aaPredicted RBP14□□□□□ -0.17
TVP23A-201ENST00000299866 MFSD5Q6N075 450 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 TTC8Q8TAM2 541 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 RPS6KC1Q96S38 1066 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 MOV10L1Q9BXT6 1211 aaKnown RBP14□□□□□ -0.17
TVP23A-201ENST00000299866 TXLNGQ9NUQ3 528 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 LRRC42Q9Y546 428 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 GM2AP17900 193 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 RFC4P35249 363 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 HOXD13P35453 343 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 TRIP13Q15645 432 aaPredicted RBP14□□□□□ -0.17
TVP23A-201ENST00000299866 KYNUQ16719 465 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 CWF19L1Q69YN2 538 aaKnown RBP14□□□□□ -0.17
TVP23A-201ENST00000299866 UBL4BQ8N7F7 174 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 CEP95Q96GE4 821 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 ROPN1BQ9BZX4 212 aaPredicted RBP14□□□□□ -0.17
TVP23A-201ENST00000299866 ROPN1Q9HAT0 212 aaPredicted RBP14□□□□□ -0.17
TVP23A-201ENST00000299866 BSDC1Q9NW68 430 aaPredicted RBP14□□□□□ -0.17
TVP23A-201ENST00000299866 NKIRAS1Q9NYS0 192 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 DLGAP2Q9P1A6 1054 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 BCS1LQ9Y276 419 aa14□□□□□ -0.17
TVP23A-201ENST00000299866 NCANO14594 1321 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms