RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 CNTNAP4Q9C0A0 1308 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 STK36Q9NRP7 1315 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 C17orf102A2RUQ5 167 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 ORC4O43929 436 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 LRG1P02750 347 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 GNA15P30679 374 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 RWDD2BP57060 319 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 TFDP2Q14188 446 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 ZNF235Q14590 738 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 BBS9Q3SYG4 887 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 HAUS6Q7Z4H7 955 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 ARRDC4Q8NCT1 418 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 NHEJ1Q9H9Q4 299 aaPredicted RBP7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 HIP1RO75146 1068 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 TOM1L1O75674 476 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 C12orf60Q5U649 245 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 TAS2R42Q7RTR8 314 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 RHOT2Q8IXI1 618 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 C17orf53Q8N3J3 647 aaPredicted RBP7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 NSUN4Q96CB9 384 aaKnown RBP7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 SRPK1Q96SB4 655 aaKnown RBP7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 YIPF2Q9BWQ6 316 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 SLC38A7Q9NVC3 462 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 DFFAO00273 331 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 FTCDO95954 541 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 CYP2C9P11712 490 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 PSMC1P62191 440 aaKnown RBP7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 SLMAPQ14BN4 828 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 XKR3Q5GH77 459 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 PDZD8Q8NEN9 1154 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 RBM41Q96IZ5 413 aaKnown RBP7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 DRC3Q9H069 523 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 CNOT8Q9UFF9 292 aaKnown RBP7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 STK38LQ9Y2H1 464 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 HEY1Q9Y5J3 304 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 VEGFAP15692 232 aaPredicted RBP7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 IFNA8P32881 189 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 ALDH1A3P47895 512 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 TTC31Q49AM3 519 aaPredicted RBP7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 PLEKHH3Q7Z736 793 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 SCYL3Q8IZE3 742 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 RNF10Q8N5U6 811 aaKnown RBP7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 SCG3Q8WXD2 468 aaKnown RBP7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 HINFPQ9BQA5 517 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 VCPKMTQ9H867 229 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 LY9Q9HBG7 655 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 POLD4Q9HCU8 107 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 TUFT1Q9NNX1 390 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 ENTPD7Q9NQZ7 604 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 ANAPC7Q9UJX3 599 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 PCDHA13Q9Y5I0 950 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 ORC6Q9Y5N6 252 aa7.39□□□□□ -1.23
GAPVD1-202ENST00000297933 CAMSAP1Q5T5Y3 1602 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 RRN3P2A6NIE6 340 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 GSG1L2A8MUP6 293 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 H3BRJ5 948 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 RCAN1P53805 252 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 PLTPP55058 493 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 NOP14P78316 857 aaKnown RBP7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 AP1B1Q10567 949 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 ALX1Q15699 326 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 KNOP1Q1ED39 458 aaKnown RBP7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 CEP55Q53EZ4 464 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 TCP11X2Q5H9J9 407 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 ZNF34Q8IZ26 560 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 DCP1BQ8IZD4 617 aaKnown RBP7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 DCUN1D1Q96GG9 259 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 ZBTB18Q99592 522 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 PPP1R12CQ9BZL4 782 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 NBPF26B4DH59 902 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 SRGAP2O75044 1071 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 DNAJC6O75061 913 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 INPP5BP32019 993 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 ALDH7A1P49419 539 aaKnown RBP7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 ZBED6P86452 979 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 BRD3Q15059 726 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 MGAT5BQ3V5L5 792 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 NBPF10Q6P3W6 841 aaKnown RBP7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 NBPF15Q8N660 670 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 MRFAP1L1Q96HT8 127 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 ZNF512Q96ME7 567 aaPredicted RBP7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 PLA2G12BQ9BX93 195 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 GINM1Q9NU53 330 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 NDFIP2Q9NV92 336 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 AFF4Q9UHB7 1163 aaKnown RBP7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 THEMIS2Q5TEJ8 643 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 CENPUQ71F23 418 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 TTC13Q8NBP0 860 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 PYROXD1Q8WU10 500 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 RMDN1Q96DB5 314 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 TIPINQ9BVW5 301 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 NYAP2Q9P242 653 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 CLCA2Q9UQC9 943 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 WDR19Q8NEZ3 1342 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 ENC1O14682 589 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 CAPN15O75808 1086 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 BAG2O95816 211 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 NDUFB10O96000 172 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 HMBSP08397 361 aa7.38□□□□□ -1.23
GAPVD1-202ENST00000297933 ARHGAP25P42331 645 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms