RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 TAF1DQ9H5J8 278 aaPredicted RBP21.46■■□□□ 1.03
NFIL3-201ENST00000297689 CNOT7Q9UIV1 285 aaKnown RBP21.46■■□□□ 1.03
NFIL3-201ENST00000297689 HACL1Q9UJ83 578 aa21.46■■□□□ 1.03
NFIL3-201ENST00000297689 USP20Q9Y2K6 914 aa21.46■■□□□ 1.03
NFIL3-201ENST00000297689 NOC2LQ9Y3T9 749 aaKnown RBP21.46■■□□□ 1.03
NFIL3-201ENST00000297689 GJA3Q9Y6H8 435 aa21.46■■□□□ 1.03
NFIL3-201ENST00000297689 IGSF9BQ9UPX0 1349 aa21.45■■□□□ 1.02
NFIL3-201ENST00000297689 ZNF233A6NK53 670 aa21.45■■□□□ 1.02
NFIL3-201ENST00000297689 CCDC188H7C350 402 aa21.45■■□□□ 1.02
NFIL3-201ENST00000297689 SART1O43290 800 aaKnown RBP21.45■■□□□ 1.02
NFIL3-201ENST00000297689 PPFIA4O75335 1185 aa21.45■■□□□ 1.02
NFIL3-201ENST00000297689 SPP2Q13103 211 aa21.45■■□□□ 1.02
NFIL3-201ENST00000297689 TNFAIP1Q13829 316 aa21.45■■□□□ 1.02
NFIL3-201ENST00000297689 KLHL7Q8IXQ5 586 aa21.45■■□□□ 1.02
NFIL3-201ENST00000297689 SLC35G2Q8TBE7 412 aa21.45■■□□□ 1.02
NFIL3-201ENST00000297689 OSGEPQ9NPF4 335 aa21.45■■□□□ 1.02
NFIL3-201ENST00000297689 LARSQ9P2J5 1176 aaKnown RBP21.45■■□□□ 1.02
NFIL3-201ENST00000297689 P4HA2O15460 535 aa21.44■■□□□ 1.02
NFIL3-201ENST00000297689 BUB1BO60566 1050 aaPredicted RBP21.44■■□□□ 1.02
NFIL3-201ENST00000297689 IRAK1P51617 712 aa21.44■■□□□ 1.02
NFIL3-201ENST00000297689 SEC14L1Q92503 715 aa21.44■■□□□ 1.02
NFIL3-201ENST00000297689 HOOK2Q96ED9 719 aa21.44■■□□□ 1.02
NFIL3-201ENST00000297689 CCDC43Q96MW1 224 aaKnown RBP21.44■■□□□ 1.02
NFIL3-201ENST00000297689 PLEKHA4Q9H4M7 779 aa21.44■■□□□ 1.02
NFIL3-201ENST00000297689 TMEM206Q9H813 350 aa21.44■■□□□ 1.02
NFIL3-201ENST00000297689 FOXN3O00409 490 aaPredicted RBP21.44■■□□□ 1.02
NFIL3-201ENST00000297689 MAPK13O15264 365 aa21.44■■□□□ 1.02
NFIL3-201ENST00000297689 PMM2O15305 246 aa21.44■■□□□ 1.02
NFIL3-201ENST00000297689 DDX3YO15523 660 aaKnown RBP21.44■■□□□ 1.02
NFIL3-201ENST00000297689 CCDC172P0C7W6 258 aa21.44■■□□□ 1.02
NFIL3-201ENST00000297689 DLG4P78352 724 aa21.44■■□□□ 1.02
NFIL3-201ENST00000297689 GTF2BQ00403 316 aa21.44■■□□□ 1.02
NFIL3-201ENST00000297689 POU5F1Q01860 360 aaKnown RBP21.44■■□□□ 1.02
NFIL3-201ENST00000297689 INTS8Q75QN2 995 aaKnown RBP21.44■■□□□ 1.02
NFIL3-201ENST00000297689 DAAM2Q86T65 1068 aa21.44■■□□□ 1.02
NFIL3-201ENST00000297689 FHDC1Q9C0D6 1143 aaPredicted RBP21.44■■□□□ 1.02
NFIL3-201ENST00000297689 MAP3K20Q9NYL2 800 aaKnown RBP21.44■■□□□ 1.02
NFIL3-201ENST00000297689 ZNF541Q9H0D2 1346 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 K7ENM7 598 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 DDX39AO00148 427 aaKnown RBP21.43■■□□□ 1.02
NFIL3-201ENST00000297689 WDR46O15213 610 aaKnown RBP21.43■■□□□ 1.02
NFIL3-201ENST00000297689 PLS3P13797 630 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 HADHBP55084 474 aaKnown RBP21.43■■□□□ 1.02
NFIL3-201ENST00000297689 CUL1Q13616 776 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 TCEAL1Q15170 157 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 EPC2Q52LR7 807 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 SRLQ86TD4 932 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 PALB2Q86YC2 1186 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 MCF2L2Q86YR7 1114 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 SYCP3Q8IZU3 236 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 SAMD3Q8N6K7 520 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 SYTL5Q8TDW5 730 aaPredicted RBP21.43■■□□□ 1.02
NFIL3-201ENST00000297689 KIAA1683Q9H0B3 1180 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 SLC38A10Q9HBR0 1119 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 LCMT1Q9UIC8 334 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 GRIN2DO15399 1336 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 TISP43B9A030 160 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 QARSP47897 775 aaKnown RBP21.43■■□□□ 1.02
NFIL3-201ENST00000297689 PPP3CAQ08209 521 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 PLS1Q14651 629 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 CFAP58Q5T655 872 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 NBPF12Q5TAG4 269 aaPredicted RBP21.43■■□□□ 1.02
NFIL3-201ENST00000297689 PLEKHO2Q8TD55 490 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 LPAR1Q92633 364 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 ARHGEF26Q96DR7 871 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 AP1M1Q9BXS5 423 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 TAS2R14Q9NYV8 317 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 AMFRQ9UKV5 643 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 PPP1R9AQ9ULJ8 1098 aa21.43■■□□□ 1.02
NFIL3-201ENST00000297689 ANKRD62A6NC57 917 aa21.42■■□□□ 1.02
NFIL3-201ENST00000297689 KRT14P02533 472 aa21.42■■□□□ 1.02
NFIL3-201ENST00000297689 PTPROQ16827 1216 aa21.42■■□□□ 1.02
NFIL3-201ENST00000297689 RDH13Q8NBN7 331 aa21.42■■□□□ 1.02
NFIL3-201ENST00000297689 VTI1AQ96AJ9 217 aa21.42■■□□□ 1.02
NFIL3-201ENST00000297689 ACCSQ96QU6 501 aa21.42■■□□□ 1.02
NFIL3-201ENST00000297689 SLITRK6Q9H5Y7 841 aa21.42■■□□□ 1.02
NFIL3-201ENST00000297689 EMSYQ7Z589 1322 aa21.42■■□□□ 1.02
NFIL3-201ENST00000297689 TMCO5BA8MYB1 307 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 CTNND1O60716 968 aaKnown RBP21.41■■□□□ 1.02
NFIL3-201ENST00000297689 ITGA4P13612 1032 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 VAMP7P51809 220 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 GUCY2FP51841 1108 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 SNRPFP62306 86 aaKnown RBP21.41■■□□□ 1.02
NFIL3-201ENST00000297689 DCAF12L1Q5VU92 463 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 C4orf19Q8IY42 314 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 CBWD1Q9BRT8 395 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 DIS3Q9Y2L1 958 aaKnown RBP21.41■■□□□ 1.02
NFIL3-201ENST00000297689 KRIT1O00522 736 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 LRRN2O75325 713 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 TNFAIP3P21580 790 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 CTNNBL1Q8WYA6 563 aaPredicted RBP21.41■■□□□ 1.02
NFIL3-201ENST00000297689 RUFY1Q96T51 708 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 AGPAT1Q99943 283 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 TIPINQ9BVW5 301 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 CAPS2Q9BXY5 557 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 DDX47Q9H0S4 455 aaKnown RBP21.41■■□□□ 1.02
NFIL3-201ENST00000297689 TBC1D22BQ9NU19 505 aa21.41■■□□□ 1.02
NFIL3-201ENST00000297689 KRT13P13646 458 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 ARHGAP44Q17R89 818 aa21.4■■□□□ 1.02
NFIL3-201ENST00000297689 ARHGEF19Q8IW93 802 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms