RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 PCDHGC5Q9Y5F6 944 aa16.87■□□□□ 0.29
UBAP1-201ENST00000297661 CEP104O60308 925 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 NR3C1P04150 777 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 NMT1P30419 496 aaKnown RBP16.86■□□□□ 0.29
UBAP1-201ENST00000297661 CXCL9Q07325 125 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 COG2Q14746 738 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 HHIPL2Q6UWX4 724 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 USP38Q8NB14 1042 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 LUC7LQ9NQ29 371 aaKnown RBP16.86■□□□□ 0.29
UBAP1-201ENST00000297661 CYP3A7-CYP3A51PA0A087WV96 503 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 CYP3A7P24462 503 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 CDC25CP30307 473 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 RRP1BQ14684 758 aaKnown RBP16.86■□□□□ 0.29
UBAP1-201ENST00000297661 EDRF1Q3B7T1 1238 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 AP1ARQ63HQ0 302 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 SYT2Q8N9I0 419 aaPredicted RBP16.86■□□□□ 0.29
UBAP1-201ENST00000297661 SAAL1Q96ER3 474 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 CHMP6Q96FZ7 201 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 FBXL5Q9UKA1 691 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 ASTN1O14525 1302 aa16.86■□□□□ 0.29
UBAP1-201ENST00000297661 GH2P01242 217 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 RPA1P27694 616 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 SF3A3Q12874 501 aaKnown RBP eCLIP16.85■□□□□ 0.29
UBAP1-201ENST00000297661 RIPK1Q13546 671 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 CUL1Q13616 776 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 NBPF20Q3BBV1 942 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 CAPRIN2Q6IMN6 1127 aaKnown RBP16.85■□□□□ 0.29
UBAP1-201ENST00000297661 ALKBH5Q6P6C2 394 aaKnown RBP16.85■□□□□ 0.29
UBAP1-201ENST00000297661 TBC1D1Q86TI0 1168 aaPredicted RBP16.85■□□□□ 0.29
UBAP1-201ENST00000297661 TPH2Q8IWU9 490 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 ERMNQ8TAM6 284 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 MDM1Q8TC05 714 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 CRYGNQ8WXF5 182 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 CCDC17Q96LX7 622 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 NEUROG2Q9H2A3 272 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 GCNT4Q9P109 453 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 SUGT1Q9Y2Z0 365 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 GFPT2O94808 682 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 ADCY2Q08462 1091 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 RPS6KA1Q15418 735 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 DCAF4Q8WV16 495 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 TAF4BQ92750 862 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 EIF2AK1Q9BQI3 630 aaKnown RBP16.85■□□□□ 0.29
UBAP1-201ENST00000297661 TDRD3Q9H7E2 651 aaKnown RBP16.85■□□□□ 0.29
UBAP1-201ENST00000297661 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.85■□□□□ 0.29
UBAP1-201ENST00000297661 PI4KBQ9UBF8 816 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 NAGPAQ9UK23 515 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 SLC12A4Q9UP95 1085 aa16.85■□□□□ 0.29
UBAP1-201ENST00000297661 TBCAO75347 108 aaKnown RBP16.84■□□□□ 0.29
UBAP1-201ENST00000297661 EIF1ADQ8N9N8 165 aaKnown RBP16.84■□□□□ 0.29
UBAP1-201ENST00000297661 MICAL1Q8TDZ2 1067 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 AGAP11Q8TF27 550 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 MBOAT7Q96N66 472 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 ZNRF3Q9ULT6 936 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 PCNTO95613 3336 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 A0A1W2PRG0 241 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 ENO4A6NNW6 628 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 CFBP00751 764 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 FLT3P36888 993 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 ECE1P42892 770 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 PLS1Q14651 629 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 EPHA7Q15375 998 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 ABCB5Q2M3G0 1257 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 KRT71Q3SY84 523 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 SYDE2Q5VT97 1194 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 FOXR2Q6PJQ5 311 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 EPM2AIP1Q7L775 607 aaPredicted RBP16.84■□□□□ 0.29
UBAP1-201ENST00000297661 ZC3H3Q8IXZ2 948 aaKnown RBP16.84■□□□□ 0.29
UBAP1-201ENST00000297661 ANKS4BQ8N8V4 417 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 CCHCR1Q8TD31 782 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 PARD3BQ8TEW8 1205 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 ZNF570Q96NI8 536 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 XPO6Q96QU8 1125 aaKnown RBP16.84■□□□□ 0.29
UBAP1-201ENST00000297661 NAP1L4Q99733 375 aaKnown RBP16.84■□□□□ 0.29
UBAP1-201ENST00000297661 VAV3Q9UKW4 847 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 SCAF8Q9UPN6 1271 aaKnown RBP16.84■□□□□ 0.29
UBAP1-201ENST00000297661 TRAF3IP3Q9Y228 551 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 RABGAP1Q9Y3P9 1069 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 MYO3BQ8WXR4 1341 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 PITPNM2Q9BZ72 1349 aa16.84■□□□□ 0.29
UBAP1-201ENST00000297661 CTNND1O60716 968 aaKnown RBP16.83■□□□□ 0.29
UBAP1-201ENST00000297661 GSTA1P08263 222 aa16.83■□□□□ 0.29
UBAP1-201ENST00000297661 ERMARDQ5T6L9 678 aa16.83■□□□□ 0.29
UBAP1-201ENST00000297661 FRMD5Q7Z6J6 570 aa16.83■□□□□ 0.29
UBAP1-201ENST00000297661 U2AF1L4Q8WU68 220 aaKnown RBP16.83■□□□□ 0.29
UBAP1-201ENST00000297661 SLC35C1Q96A29 364 aa16.83■□□□□ 0.29
UBAP1-201ENST00000297661 ZDHHC15Q96MV8 337 aa16.83■□□□□ 0.29
UBAP1-201ENST00000297661 SIX2Q9NPC8 291 aa16.83■□□□□ 0.29
UBAP1-201ENST00000297661 NOP53Q9NZM5 478 aaKnown RBP16.83■□□□□ 0.29
UBAP1-201ENST00000297661 NYAP2Q9P242 653 aa16.83■□□□□ 0.29
UBAP1-201ENST00000297661 TMEM59LQ9UK28 342 aa16.83■□□□□ 0.29
UBAP1-201ENST00000297661 SMNDC1O75940 238 aaKnown RBP eCLIP16.83■□□□□ 0.28
UBAP1-201ENST00000297661 ITGA4P13612 1032 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 AP3B2Q13367 1082 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 CCDC174Q6PII3 467 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 MYCT1Q8N699 235 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 MKL1Q969V6 931 aa16.83■□□□□ 0.28
UBAP1-201ENST00000297661 L3MBTL3Q96JM7 780 aaPredicted RBP16.83■□□□□ 0.28
UBAP1-201ENST00000297661 DDX47Q9H0S4 455 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms