RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 NOP56O00567 594 aaKnown RBP23.31■■□□□ 1.32
SOX17-201ENST00000297316 ALCAMQ13740 583 aa23.31■■□□□ 1.32
SOX17-201ENST00000297316 FAM110CQ1W6H9 321 aa23.31■■□□□ 1.32
SOX17-201ENST00000297316 TAPT1Q6NXT6 567 aa23.31■■□□□ 1.32
SOX17-201ENST00000297316 SAPCD2Q86UD0 394 aa23.31■■□□□ 1.32
SOX17-201ENST00000297316 GLG1Q92896 1179 aa23.31■■□□□ 1.32
SOX17-201ENST00000297316 TMEM206Q9H813 350 aa23.31■■□□□ 1.32
SOX17-201ENST00000297316 TBX20Q9UMR3 447 aa23.31■■□□□ 1.32
SOX17-201ENST00000297316 USP20Q9Y2K6 914 aa23.31■■□□□ 1.32
SOX17-201ENST00000297316 EXOC3O60645 756 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 LCA5LO95447 670 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 VAV2P52735 878 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 SMTNP53814 917 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 SFMBT2Q5VUG0 894 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 KCNV1Q6PIU1 500 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 NAPGQ99747 312 aaPredicted RBP23.3■■□□□ 1.32
SOX17-201ENST00000297316 NIFKQ9BYG3 293 aaKnown RBP23.3■■□□□ 1.32
SOX17-201ENST00000297316 DHX33Q9H6R0 707 aaKnown RBP23.3■■□□□ 1.32
SOX17-201ENST00000297316 SIX2Q9NPC8 291 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 FHOD1Q9Y613 1164 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 GFPT1Q06210 699 aaPredicted RBP23.3■■□□□ 1.32
SOX17-201ENST00000297316 EXOC3L4Q17RC7 722 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 FAM160B1Q5W0V3 765 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 DPP9Q86TI2 863 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 AFAP1L1Q8TED9 768 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 DEF6Q9H4E7 631 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 PCDHA13Q9Y5I0 950 aa23.3■■□□□ 1.32
SOX17-201ENST00000297316 SPDYE4A6NLX3 237 aa23.29■■□□□ 1.32
SOX17-201ENST00000297316 STRNO43815 780 aa23.29■■□□□ 1.32
SOX17-201ENST00000297316 IPO7O95373 1038 aaKnown RBP23.29■■□□□ 1.32
SOX17-201ENST00000297316 TRIM49P0CI25 452 aa23.29■■□□□ 1.32
SOX17-201ENST00000297316 TRIM49CP0CI26 452 aa23.29■■□□□ 1.32
SOX17-201ENST00000297316 MAPK8IP2Q13387 824 aaPredicted RBP23.29■■□□□ 1.32
SOX17-201ENST00000297316 DRP2Q13474 957 aa23.29■■□□□ 1.32
SOX17-201ENST00000297316 RAPGEF1Q13905 1077 aa23.29■■□□□ 1.32
SOX17-201ENST00000297316 TTLL4Q14679 1199 aa23.29■■□□□ 1.32
SOX17-201ENST00000297316 KLHDC7AQ5VTJ3 777 aa23.29■■□□□ 1.32
SOX17-201ENST00000297316 ASAP3Q8TDY4 903 aa23.29■■□□□ 1.32
SOX17-201ENST00000297316 NTPCRQ9BSD7 190 aaKnown RBP23.29■■□□□ 1.32
SOX17-201ENST00000297316 FRMD4BQ9Y2L6 1034 aa23.29■■□□□ 1.32
SOX17-201ENST00000297316 AKR1B10O60218 316 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 SNAI1O95863 264 aaPredicted RBP23.28■■□□□ 1.32
SOX17-201ENST00000297316 GRB14Q14449 540 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 SPA17Q15506 151 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 TARBP2Q15633 366 aaKnown RBP23.28■■□□□ 1.32
SOX17-201ENST00000297316 TDRD12Q587J7 1177 aaKnown RBP23.28■■□□□ 1.32
SOX17-201ENST00000297316 TAS1R3Q7RTX0 852 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 GOLGA5Q8TBA6 731 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 SCFD2Q8WU76 684 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 SPIRE2Q8WWL2 714 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 SYN2Q92777 582 aaPredicted RBP23.28■■□□□ 1.32
SOX17-201ENST00000297316 MKNK1Q9BUB5 465 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 AZI2Q9H6S1 392 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 PLCB1Q9NQ66 1216 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.28■■□□□ 1.32
SOX17-201ENST00000297316 GOLGA8IPA6NC78 632 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 GOLGA8JA6NMD2 632 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 UCHL3P15374 230 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 ADSSP30520 456 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 ADCYAP1R1P41586 468 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 ARID5AQ03989 594 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 MAMDC4Q6UXC1 1216 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 SLC9A9Q8IVB4 645 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 ABRAQ8N0Z2 381 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 NPLOC4Q8TAT6 608 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 IFIH1Q9BYX4 1025 aaKnown RBP23.28■■□□□ 1.32
SOX17-201ENST00000297316 EPC1Q9H2F5 836 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 HSPBP1Q9NZL4 362 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 CDC23Q9UJX2 597 aa23.28■■□□□ 1.32
SOX17-201ENST00000297316 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.27■■□□□ 1.32
SOX17-201ENST00000297316 ENC1O14682 589 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 KRT86O43790 486 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 AMPD2Q01433 879 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 SLC39A4Q6P5W5 647 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 GJB7Q6PEY0 223 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 PLEKHH3Q7Z736 793 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 MAP4K3Q8IVH8 894 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 KATNBL1Q9H079 304 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 NRBP2Q9NSY0 501 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 GCNT4Q9P109 453 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 SSU72P8A0A1W2PR75 194 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 MACROD2A1Z1Q3 448 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 GLRA2P23416 452 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 DLG4P78352 724 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 ENOX2Q16206 610 aaKnown RBP23.27■■□□□ 1.32
SOX17-201ENST00000297316 RGMBQ6NW40 437 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 FBXO38Q6PIJ6 1188 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 ZBTB10Q96DT7 871 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 MAML3Q96JK9 1138 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 C17orf75Q9HAS0 396 aa23.27■■□□□ 1.32
SOX17-201ENST00000297316 DIS3Q9Y2L1 958 aaKnown RBP23.27■■□□□ 1.32
SOX17-201ENST00000297316 EFCAB8A8MWE9 144 aa23.26■■□□□ 1.31
SOX17-201ENST00000297316 LGR5O75473 907 aa23.26■■□□□ 1.31
SOX17-201ENST00000297316 SERPING1P05155 500 aa23.26■■□□□ 1.31
SOX17-201ENST00000297316 ARHGAP1Q07960 439 aa23.26■■□□□ 1.31
SOX17-201ENST00000297316 CBWD6Q4V339 395 aa23.26■■□□□ 1.31
SOX17-201ENST00000297316 CBWD3Q5JTY5 395 aa23.26■■□□□ 1.31
SOX17-201ENST00000297316 CBWD5Q5RIA9 395 aa23.26■■□□□ 1.31
SOX17-201ENST00000297316 GBP6Q6ZN66 633 aa23.26■■□□□ 1.31
SOX17-201ENST00000297316 TRAPPC12Q8WVT3 735 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms