RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 STK33Q9BYT3 514 aa13.55□□□□□ -0.24
TMEM200A-201ENST00000296978 ACP6Q9NPH0 428 aa13.55□□□□□ -0.24
TMEM200A-201ENST00000296978 KLHL14Q9P2G3 628 aa13.55□□□□□ -0.24
TMEM200A-201ENST00000296978 CICQ96RK0 1608 aaPredicted RBP13.55□□□□□ -0.24
TMEM200A-201ENST00000296978 STRCP1A6NGW2 1772 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 COMTP21964 271 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 RPA1P27694 616 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 SYT2Q8N9I0 419 aaPredicted RBP13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 SLC30A5Q8TAD4 765 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 LNX1Q8TBB1 728 aaPredicted RBP13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 F5H6K3 240 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 POC1B-GALNT4F8VUJ3 575 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 KRT15P19012 456 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 SMARCA1P28370 1054 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 PDE6CP51160 858 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 SLC12A3P55017 1021 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 KLRC3Q07444 240 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 MAPK7Q13164 816 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 TNIP1Q15025 636 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 YTHDF3Q7Z739 585 aaKnown RBP13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 PALB2Q86YC2 1186 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 LRRC57Q8N9N7 239 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 BICD1Q96G01 975 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 FAM129AQ9BZQ8 928 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 ECT2Q9H8V3 914 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 ZNF142P52746 1687 aaPredicted RBP13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 COL18A1P39060 1754 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 PITPNM2Q9BZ72 1349 aa13.54□□□□□ -0.24
TMEM200A-201ENST00000296978 ANKRD62A6NC57 917 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 FOXO6A8MYZ6 492 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 CLDN3O15551 220 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 GCKP35557 465 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 RHBDL3P58872 404 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 ARHGAP27Q6ZUM4 889 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 AGPAT1Q99943 283 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 FAM167BQ9BTA0 163 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 LRRC4CQ9HCJ2 640 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 HOMER2Q9NSB8 354 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 APEX2Q9UBZ4 518 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 SLC12A6Q9UHW9 1150 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 UTRNP46939 3433 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 SYNGAP1Q96PV0 1343 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 IGSF9BQ9UPX0 1349 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 BCL9LQ86UU0 1499 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 SERPINB2P05120 415 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 TMEM253P0C7T8 217 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 GAP43P17677 238 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 NT5C2P49902 561 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 GPC5P78333 572 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 SETDB1Q15047 1291 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 CBWD6Q4V339 395 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 CBWD3Q5JTY5 395 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 CBWD5Q5RIA9 395 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 PPP1R18Q6NYC8 613 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 RHOT2Q8IXI1 618 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 ALG3Q92685 438 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 STAMBPL1Q96FJ0 436 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 SPATA31A1Q5TZJ5 1347 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 FAM86B1E9PN63 330 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 FAM86B2P0C5J1 330 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 BRAFP15056 766 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 PTENP60484 403 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 C2CD6Q53TS8 623 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 KAZNQ674X7 775 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 CPXCR1Q8N123 301 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 POP1Q99575 1024 aaKnown RBP13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 CARD9Q9H257 536 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 ABCF3Q9NUQ8 709 aa13.53□□□□□ -0.24
TMEM200A-201ENST00000296978 FAM187AA6NFU0 413 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 MSH4O15457 936 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 CYP26A1O43174 497 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 DIAPH2O60879 1101 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 UBOX5O94941 541 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 DRD4P21917 467 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 CHRNA3P32297 505 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 SSTR3P32745 418 aaPredicted RBP13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 RPL21P46778 160 aaKnown RBP13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 SLMAPQ14BN4 828 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 TMED2Q15363 201 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 KYNUQ16719 465 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 EPC2Q52LR7 807 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 RINT1Q6NUQ1 792 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 SEPT14Q6ZU15 432 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 NSMCE1Q8WV22 266 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 RUNDC3BQ96NL0 473 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 NUP85Q9BW27 656 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 TRIM7Q9C029 511 aa13.52□□□□□ -0.24
TMEM200A-201ENST00000296978 TMEM120BA0PK00 339 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 EML1O00423 815 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 PODXLO00592 558 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 GAS8O95995 478 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 SESN3P58005 492 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 DHX34Q14147 1143 aaKnown RBP13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 ABCB5Q2M3G0 1257 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 ZNF449Q6P9G9 518 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 RNF207Q6ZRF8 634 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 TBC1D16Q8TBP0 767 aa13.52□□□□□ -0.25
TMEM200A-201ENST00000296978 ATG4AQ8WYN0 398 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms