RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 TMEM47Q9BQJ4 181 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 UGGT1Q9NYU2 1555 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 SFI1A8K8P3 1242 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 TCP10L2B9ZVM9 353 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 PPP1R12AO14974 1030 aaPredicted RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 NVLO15381 856 aaKnown RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 SORBS3O60504 671 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 MED21Q13503 144 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 MORF4L2Q15014 288 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 HSPH1Q92598 858 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 GCOM2Q9BZD3 368 aaPredicted RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 ISCUQ9H1K1 167 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 SNX25Q9H3E2 840 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 IP6K2Q9UHH9 426 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 NEO1Q92859 1461 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 RNF103-CHMP3A0A140T963 221 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 ENO4A6NNW6 628 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 ZBTB5O15062 677 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 PHF2O75151 1096 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 GYPCP04921 128 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 KITP10721 976 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 RABGAP1LQ5R372 815 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 LRRC31Q6UY01 552 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 KDM7AQ6ZMT4 941 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 ENOSF1Q7L5Y1 443 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 DNAJC9Q8WXX5 260 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 TRIM9Q9C026 710 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 DDX56Q9NY93 547 aaKnown RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 KIF1BO60333 1816 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 RHOBTB3O94955 611 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 KRT7P08729 469 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 FCER1AP12319 257 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 LONP2Q86WA8 852 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 ENGASEQ8NFI3 743 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 MSTO1Q9BUK6 570 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 MOV10L1Q9BXT6 1211 aaKnown RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 ASNSD1Q9NWL6 643 aa11.74□□□□□ -0.53
PBRM1-201ENST00000296302 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.74□□□□□ -0.53
PBRM1-201ENST00000296302 CFAP65Q6ZU64 1925 aaKnown RBP11.73□□□□□ -0.53
PBRM1-201ENST00000296302 MYO5CQ9NQX4 1742 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 SHROOM2Q13796 1616 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 PRR36Q9H6K5 1346 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 PP2D1A8MPX8 630 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 GOLGA8MH3BSY2 632 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 PSAPP07602 524 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 ITIH2P19823 946 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 PEX3P56589 373 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 TRIM72Q6ZMU5 477 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 C11orf70Q9BRQ4 267 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 EHD2Q9NZN4 543 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 PNPLA6Q8IY17 1366 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 ERBB3P21860 1342 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 VAMP7P51809 220 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 HDAC4P56524 1084 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 CRYMQ14894 314 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 DOK7Q18PE1 504 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 KIF19Q2TAC6 998 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 FAM160B2Q86V87 743 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 ALKBH8Q96BT7 664 aaKnown RBP11.73□□□□□ -0.53
PBRM1-201ENST00000296302 BSDC1Q9NW68 430 aaPredicted RBP11.73□□□□□ -0.53
PBRM1-201ENST00000296302 IRAK4Q9NWZ3 460 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 ZBTB12Q9Y330 459 aaPredicted RBP11.73□□□□□ -0.53
PBRM1-201ENST00000296302 KCNA3P22001 575 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 CCND2P30279 289 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 SEC24CP53992 1094 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 CCDC92Q53HC0 331 aaPredicted RBP11.73□□□□□ -0.53
PBRM1-201ENST00000296302 PIGOQ8TEQ8 1089 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 DCAF4Q8WV16 495 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 FOXP3Q9BZS1 431 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
PBRM1-201ENST00000296302 GEMIN8Q9NWZ8 242 aaKnown RBP11.73□□□□□ -0.53
PBRM1-201ENST00000296302 L3MBTL1Q9Y468 752 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 K7ERI5 159 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 PDXKO00764 312 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 SLC1A1P43005 524 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 TMEM154Q6P9G4 183 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 MYLK4Q86YV6 388 aaPredicted RBP11.73□□□□□ -0.53
PBRM1-201ENST00000296302 C1orf54Q8WWF1 131 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 HEXIM2Q96MH2 286 aaKnown RBP11.73□□□□□ -0.53
PBRM1-201ENST00000296302 VPS11Q9H270 941 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 LRRC4Q9HBW1 653 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 NGRNQ9NPE2 291 aaKnown RBP11.73□□□□□ -0.53
PBRM1-201ENST00000296302 AGPAT5Q9NUQ2 364 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 TRIM10Q9UDY6 481 aa11.73□□□□□ -0.53
PBRM1-201ENST00000296302 EFCAB6Q5THR3 1501 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 ANKARQ7Z5J8 1434 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 POTEB3A0JP26 581 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 PALM3A6NDB9 673 aaPredicted RBP11.72□□□□□ -0.53
PBRM1-201ENST00000296302 POTECB2RU33 542 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 ASAP2O43150 1006 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 SMARCA1P28370 1054 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 CARSP49589 748 aaKnown RBP11.72□□□□□ -0.53
PBRM1-201ENST00000296302 PRELPP51888 382 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 AP1B1Q10567 949 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 POTEBQ6S5H4 581 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 PI4KBQ9UBF8 816 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 PCDHA6Q9UN73 950 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 L1RE1Q9UN81 338 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 PCDHA8Q9Y5H6 950 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms