RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CYTH2Q99418 400 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 ZFYVE28Q9HCC9 887 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 NRXN1Q9ULB1 1477 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 PDE2AO00408 941 aaPredicted RBP14.39□□□□□ -0.11
HPS3-201ENST00000296051 EVI5O60447 810 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 NTSR2O95665 410 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 BRAFP15056 766 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 PEX3P56589 373 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 DYNLT1P63172 113 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 DSTYKQ6XUX3 929 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 TRIM50Q86XT4 487 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.39□□□□□ -0.11
HPS3-201ENST00000296051 TRIM4Q9C037 500 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 TTC7AQ9ULT0 858 aaPredicted RBP14.39□□□□□ -0.11
HPS3-201ENST00000296051 ZC3H13Q5T200 1668 aaKnown RBP14.39□□□□□ -0.11
HPS3-201ENST00000296051 SALL1Q9NSC2 1324 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 EXOC1LA0A1B0GW35 172 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 I3L4J1 428 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 SMIM22K7EJ46 135 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 DYNC1LI2O43237 492 aaPredicted RBP14.39□□□□□ -0.11
HPS3-201ENST00000296051 SKAP2O75563 359 aaPredicted RBP14.39□□□□□ -0.11
HPS3-201ENST00000296051 CHN1P15882 459 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 RBM46Q8TBY0 533 aaKnown RBP14.39□□□□□ -0.11
HPS3-201ENST00000296051 SAAL1Q96ER3 474 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 DCTN4Q9UJW0 460 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 A0A087X0T9 212 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 FAM228BP0C875 321 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 MAP1SQ66K74 1059 aaPredicted RBP14.38□□□□□ -0.11
HPS3-201ENST00000296051 STYK1Q6J9G0 422 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 NSUN4Q96CB9 384 aaKnown RBP14.38□□□□□ -0.11
HPS3-201ENST00000296051 DEPDC5O75140 1603 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 DDNO94850 711 aaPredicted RBP14.38□□□□□ -0.11
HPS3-201ENST00000296051 ADCY2Q08462 1091 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 PSMD2Q13200 908 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 MMGT1Q8N4V1 131 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 ZNF280CQ8ND82 737 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 CASKIN2Q8WXE0 1202 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 RAD54LQ92698 747 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 ABCB11O95342 1321 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 MYOM1P52179 1685 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 FAM107AO95990 144 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 FAM153BP0C7A2 387 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 SLC18A3Q16572 532 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 FAM153CQ494X1 144 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 C10orf76Q5T2E6 689 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 TTBK2Q6IQ55 1244 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 ARHGAP24Q8N264 748 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 PACSIN1Q9BY11 444 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 BARHL2Q9NY43 387 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 FAM153AQ9UHL3 310 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 PIK3C2BO00750 1634 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 TCP11X1B4DZS4 312 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 BNIP3LO60238 219 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 NBPF9Q3BBW0 867 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 FAM117BQ6P1L5 589 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 SPATA33Q96N06 139 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 ECT2Q9H8V3 914 aa14.38□□□□□ -0.11
HPS3-201ENST00000296051 PDS5AQ29RF7 1337 aaKnown RBP14.37□□□□□ -0.11
HPS3-201ENST00000296051 CNTNAP4Q9C0A0 1308 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 A0A0G2JND7 137 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 PVALEFA0A1B0GWK0 134 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 LUC7L3O95232 432 aaKnown RBP14.37□□□□□ -0.11
HPS3-201ENST00000296051 TROAPQ12815 778 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 BFSP1Q12934 665 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 SLMAPQ14BN4 828 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 PHLDB3Q6NSJ2 640 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 CDC42EP5Q6NZY7 148 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 LDHDQ86WU2 507 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 HIPK4Q8NE63 616 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 MIPOL1Q8TD10 442 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 NT5C1BQ96P26 610 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 ACCSQ96QU6 501 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 CCSER1Q9C0I3 900 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 PARVGQ9HBI0 331 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 ARHGAP20Q9P2F6 1191 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 PLAGL2Q9UPG8 496 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 PCDHB4Q9Y5E5 795 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 RASA4BC9J798 803 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 RNF225M0QZC1 329 aaPredicted RBP14.37□□□□□ -0.11
HPS3-201ENST00000296051 RASA4O43374 803 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 RNF8O76064 485 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 TXNP10599 105 aaKnown RBP14.37□□□□□ -0.11
HPS3-201ENST00000296051 CD58P19256 250 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 POLR2BP30876 1174 aaKnown RBP14.37□□□□□ -0.11
HPS3-201ENST00000296051 PTK2Q05397 1052 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 KRT81Q14533 505 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 PAPD7Q5XG87 772 aaKnown RBP14.37□□□□□ -0.11
HPS3-201ENST00000296051 C1orf54Q8WWF1 131 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 RSAD2Q8WXG1 361 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 FAM217BQ9NTX9 383 aaPredicted RBP14.37□□□□□ -0.11
HPS3-201ENST00000296051 TYW1Q9NV66 732 aaKnown RBP14.37□□□□□ -0.11
HPS3-201ENST00000296051 HSD17B3P37058 310 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 NSFP46459 744 aaKnown RBP14.37□□□□□ -0.11
HPS3-201ENST00000296051 KCNJ1P48048 391 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 GCLMP48507 274 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 DRAP1Q14919 205 aaPredicted RBP14.37□□□□□ -0.11
HPS3-201ENST00000296051 SWSAP1Q6NVH7 229 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 ANKRD13AQ8IZ07 590 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 NME8Q8N427 588 aa14.37□□□□□ -0.11
HPS3-201ENST00000296051 TSEN2Q8NCE0 465 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms