RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 SERPINB3P29508 390 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 TNNI2P48788 182 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 PTENP60484 403 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 KLRC3Q07444 240 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 P3H1Q32P28 736 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 DUPD1Q68J44 220 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 EPM2AIP1Q7L775 607 aaPredicted RBP10.93□□□□□ -0.66
CLDN1-201ENST00000295522 CROCCP2Q86T23 111 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 C4orf33Q8N1A6 199 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 CFAP61Q8NHU2 1237 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 TBCKQ8TEA7 893 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 C9orf72Q96LT7 481 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 EPB41L4BQ9H329 900 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 MKNK2Q9HBH9 465 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 PIK3C2AO00443 1686 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 SMCO2A6NFE2 343 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 RBAK-RBAKDNI3L0D1 243 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 DDAH1O94760 285 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 CTTNQ14247 550 aaKnown RBP10.92□□□□□ -0.66
CLDN1-201ENST00000295522 DSTYKQ6XUX3 929 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 ASRGL1Q7L266 308 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 PRUNE1Q86TP1 453 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 TRIM42Q8IWZ5 723 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 LRRC57Q8N9N7 239 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 PNMA1Q8ND90 353 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 PHTF1Q9UMS5 762 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 ZNF711Q9Y462 761 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 SLC4A7Q9Y6M7 1214 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 ARHGAP23Q9P227 1491 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 GPR75-ASB3A0A0A6YYF3 556 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 MAGEA13PA6NCF6 341 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 ADAMTS2O95450 1211 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 POLGP54098 1239 aaPredicted RBP10.92□□□□□ -0.66
CLDN1-201ENST00000295522 MPP2Q14168 576 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 MAP7Q14244 749 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 CERKLQ49MI3 558 aaPredicted RBP10.92□□□□□ -0.66
CLDN1-201ENST00000295522 FOXB2Q5VYV0 432 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 MTDHQ86UE4 582 aaKnown RBP10.92□□□□□ -0.66
CLDN1-201ENST00000295522 CEP70Q8NHQ1 597 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 ZFAND2BQ8WV99 257 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 C1orf54Q8WWF1 131 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 DNAJC1Q96KC8 554 aaKnown RBP10.92□□□□□ -0.66
CLDN1-201ENST00000295522 RUNDC3BQ96NL0 473 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 FGFBP2Q9BYJ0 223 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 ZDHHC18Q9NUE0 388 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 SUCLA2Q9P2R7 463 aaPredicted RBP10.92□□□□□ -0.66
CLDN1-201ENST00000295522 ASB3Q9Y575 518 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.92□□□□□ -0.66
CLDN1-201ENST00000295522 ANKRD63C9JTQ0 380 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 CLIC2O15247 247 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 TJP3O95049 919 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 GJB6O95452 261 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 XRCC5P13010 732 aaKnown RBP10.92□□□□□ -0.66
CLDN1-201ENST00000295522 STAT1P42224 750 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 MAGEA10P43363 369 aaPredicted RBP10.92□□□□□ -0.66
CLDN1-201ENST00000295522 MARCKSL1P49006 195 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 CTSWP56202 376 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 TFAP4Q01664 338 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 THOC5Q13769 683 aaKnown RBP10.92□□□□□ -0.66
CLDN1-201ENST00000295522 GALNT17Q6IS24 598 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 LRRC74BQ6ZQY2 392 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 MIPOL1Q8TD10 442 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 CKAP2Q8WWK9 683 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 DTNBP1Q96EV8 351 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 BICD1Q96G01 975 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 FAM118BQ9BPY3 351 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 ETNK2Q9NVF9 386 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 TMEM260Q9NX78 707 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 GCNT4Q9P109 453 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 PARP2Q9UGN5 583 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 CHKBQ9Y259 395 aa10.92□□□□□ -0.66
CLDN1-201ENST00000295522 BZW2Q9Y6E2 419 aaKnown RBP10.92□□□□□ -0.66
CLDN1-201ENST00000295522 TNFAIP3P21580 790 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 CA4P22748 312 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 GJC1P36383 396 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 TMEM62Q0P6H9 643 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 COASYQ13057 564 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 MDH1BQ5I0G3 518 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 ZNF746Q6NUN9 644 aaPredicted RBP10.91□□□□□ -0.66
CLDN1-201ENST00000295522 ZDHHC24Q6UX98 284 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 NEK8Q86SG6 692 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 RNF168Q8IYW5 571 aaPredicted RBP10.91□□□□□ -0.66
CLDN1-201ENST00000295522 WDR66Q8TBY9 1149 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 NUDT12Q9BQG2 462 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 EDEM3Q9BZQ6 932 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 PHACTR1Q9C0D0 580 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 DMAP1Q9NPF5 467 aaPredicted RBP10.91□□□□□ -0.66
CLDN1-201ENST00000295522 USP40Q9NVE5 1235 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 TMOD3Q9NYL9 352 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 BCL9LQ86UU0 1499 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 PASKQ96RG2 1323 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 PITPNM2Q9BZ72 1349 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 GSTA2P09210 222 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 DLATP10515 647 aaKnown RBP10.91□□□□□ -0.66
CLDN1-201ENST00000295522 CETN2P41208 172 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 GYG1P46976 350 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 MYBPC3Q14896 1274 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 CNPY1Q3B7I2 92 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 OR52E8Q6IFG1 317 aa10.91□□□□□ -0.66
CLDN1-201ENST00000295522 VSTM1Q6UX27 236 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms