RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.22■□□□□ 0.034e-6■■■■■ 63.2
NXF1-201ENST00000294172 SLC9A2Q9UBY0 812 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 TBX20Q9UMR3 447 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 TARSL2A2RTX5 802 aaKnown RBP15.21■□□□□ 0.03
NXF1-201ENST00000294172 DENND3A2RUS2 1198 aa15.21■□□□□ 0.03
NXF1-201ENST00000294172 DDNO94850 711 aaPredicted RBP15.21■□□□□ 0.03
NXF1-201ENST00000294172 MCM3P25205 808 aa15.21■□□□□ 0.03
NXF1-201ENST00000294172 GNPTABQ3T906 1256 aa15.21■□□□□ 0.03
NXF1-201ENST00000294172 NOL9Q5SY16 702 aaKnown RBP15.21■□□□□ 0.03
NXF1-201ENST00000294172 TREML2Q5T2D2 321 aa15.21■□□□□ 0.03
NXF1-201ENST00000294172 TMEM161BQ8NDZ6 487 aa15.21■□□□□ 0.03
NXF1-201ENST00000294172 SAAL1Q96ER3 474 aa15.21■□□□□ 0.03
NXF1-201ENST00000294172 SENP7Q9BQF6 1050 aa15.21■□□□□ 0.03
NXF1-201ENST00000294172 GPR88Q9GZN0 384 aa15.21■□□□□ 0.03
NXF1-201ENST00000294172 ST6GALNAC4Q9H4F1 302 aa15.21■□□□□ 0.03
NXF1-201ENST00000294172 KMT5AQ9NQR1 393 aa15.21■□□□□ 0.03
NXF1-201ENST00000294172 SEPT11Q9NVA2 429 aaKnown RBP15.21■□□□□ 0.03
NXF1-201ENST00000294172 SEPT9Q9UHD8 586 aaPredicted RBP15.21■□□□□ 0.03
NXF1-201ENST00000294172 ANKRD63C9JTQ0 380 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 H2AFZP0C0S5 128 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 ANXA13P27216 316 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 OAS2P29728 719 aaKnown RBP15.21■□□□□ 0.02
NXF1-201ENST00000294172 RNASE9P60153 205 aaKnown RBP15.21■□□□□ 0.02
NXF1-201ENST00000294172 ACTR2P61160 394 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 CFAP221Q4G0U5 840 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 MEI1Q5TIA1 1274 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.21■□□□□ 0.02
NXF1-201ENST00000294172 H2AFVQ71UI9 128 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 CCDC60Q8IWA6 550 aaPredicted RBP15.21■□□□□ 0.02
NXF1-201ENST00000294172 C12orf56Q8IXR9 622 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 ANKRD35Q8N283 1001 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 BSNDQ8WZ55 320 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 CDHR1Q96JP9 859 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 LRRC1Q9BTT6 524 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 ZCCHC17Q9NP64 241 aaKnown RBP15.21■□□□□ 0.02
NXF1-201ENST00000294172 UBE2TQ9NPD8 197 aaPredicted RBP15.21■□□□□ 0.02
NXF1-201ENST00000294172 EXOC7Q9UPT5 735 aa15.21■□□□□ 0.02
NXF1-201ENST00000294172 CNTN2Q02246 1040 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 CASP8Q14790 479 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 CBWD2Q8IUF1 395 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 GSPT2Q8IYD1 628 aaKnown RBP15.2■□□□□ 0.02
NXF1-201ENST00000294172 MMGT1Q8N4V1 131 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 SLC17A8Q8NDX2 589 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 LMO3Q8TAP4 145 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 LNX1Q8TBB1 728 aaPredicted RBP15.2■□□□□ 0.02
NXF1-201ENST00000294172 PLEKHO2Q8TD55 490 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 HDAC7Q8WUI4 952 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 CCDC127Q96BQ5 260 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 GDAP1L1Q96MZ0 367 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 SNCAIPQ9Y6H5 919 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 BTNL10A8MVZ5 291 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 FOXN3O00409 490 aaPredicted RBP15.2■□□□□ 0.02
NXF1-201ENST00000294172 ADSSP30520 456 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 TNNT3P45378 269 aaPredicted RBP15.2■□□□□ 0.02
NXF1-201ENST00000294172 SLC7A5Q01650 507 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 SP2Q02086 613 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 PRKCEQ02156 737 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 ZNF572Q7Z3I7 529 aaPredicted RBP15.2■□□□□ 0.02
NXF1-201ENST00000294172 KIFAP3Q92845 792 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 PDE11AQ9HCR9 933 aa15.2■□□□□ 0.02
NXF1-201ENST00000294172 RBM12Q9NTZ6 932 aaKnown RBP15.2■□□□□ 0.02
NXF1-201ENST00000294172 POLR2AP24928 1970 aaKnown RBP15.19■□□□□ 0.02
NXF1-201ENST00000294172 SPATA31C2B4DYI2 1134 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 DKC1O60832 514 aaKnown RBP eCLIP15.19■□□□□ 0.02
NXF1-201ENST00000294172 ADRB2P07550 413 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 CCDC172P0C7W6 258 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 CNGA1P29973 690 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 FSTL1Q12841 308 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 SNRNP35Q16560 246 aaKnown RBP15.19■□□□□ 0.02
NXF1-201ENST00000294172 IFI16Q16666 785 aaKnown RBP15.19■□□□□ 0.02
NXF1-201ENST00000294172 C1orf220Q5T0J3 134 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 SEPT14Q6ZU15 432 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 CYFIP1Q7L576 1253 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 ARHGEF19Q8IW93 802 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 TAF4BQ92750 862 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 UBXN6Q9BZV1 441 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 NENFQ9UMX5 172 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 KIAA1217Q5T5P2 1943 aa15.19■□□□□ 0.02
NXF1-201ENST00000294172 ADM5C9JUS6 153 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 N4BP1O75113 896 aaKnown RBP15.18■□□□□ 0.02
NXF1-201ENST00000294172 STBD1O95210 358 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 MXI1P50539 228 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 GALCP54803 685 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 ITIH3Q06033 890 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 RPS6KA1Q15418 735 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 STXBP2Q15833 593 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 MAP9Q49MG5 647 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 MIS18BP1Q6P0N0 1132 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 ABHD15Q6UXT9 468 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 MAP4K3Q8IVH8 894 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 SLC30A5Q8TAD4 765 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 TMEM174Q8WUU8 243 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 CYP26B1Q9NR63 512 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 NFASCO94856 1347 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 LRRIQ3A6PVS8 624 aaPredicted RBP15.18■□□□□ 0.02
NXF1-201ENST00000294172 KCNK3O14649 394 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 EIF3JO75822 258 aaKnown RBP15.18■□□□□ 0.02
NXF1-201ENST00000294172 STAM2O75886 525 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 ABCB4P21439 1286 aa15.18■□□□□ 0.02
NXF1-201ENST00000294172 TNFAIP3P21580 790 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms