RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 SEC23AQ15436 765 aa17.7■□□□□ 0.42
UBXN1-201ENST00000294119 IFIT1BQ5T764 474 aaKnown RBP17.7■□□□□ 0.42
UBXN1-201ENST00000294119 USP17L6PQ6QN14 398 aa17.7■□□□□ 0.42
UBXN1-201ENST00000294119 TMEM87AQ8NBN3 555 aa17.7■□□□□ 0.42
UBXN1-201ENST00000294119 SNX21Q969T3 373 aa17.7■□□□□ 0.42
UBXN1-201ENST00000294119 AZI2Q9H6S1 392 aa17.7■□□□□ 0.42
UBXN1-201ENST00000294119 JPH1Q9HDC5 661 aaPredicted RBP17.7■□□□□ 0.42
UBXN1-201ENST00000294119 MTF2Q9Y483 593 aaPredicted RBP17.7■□□□□ 0.42
UBXN1-201ENST00000294119 DSPP15924 2871 aaKnown RBP17.7■□□□□ 0.42
UBXN1-201ENST00000294119 ASH1LQ9NR48 2969 aaKnown RBP17.69■□□□□ 0.42
UBXN1-201ENST00000294119 MYH15Q9Y2K3 1946 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 IGKV6D-21A0A0A0MT36 114 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 A0A0U1RQF3 1178 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.69■□□□□ 0.42
UBXN1-201ENST00000294119 CARNS1A5YM72 827 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 MAFGO15525 162 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 PRC1O43663 620 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 ATG7O95352 703 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 CNPP09543 421 aaKnown RBP17.69■□□□□ 0.42
UBXN1-201ENST00000294119 TDGF1P13385 188 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 LAMP2P13473 410 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 SLC26A2P50443 739 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 STAT5BP51692 787 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 FGD1P98174 961 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 SPEM2Q0P670 501 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 KIZQ2M2Z5 673 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 N4BP2L1Q5TBK1 243 aaPredicted RBP17.69■□□□□ 0.42
UBXN1-201ENST00000294119 HELQQ8TDG4 1101 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 DDX1Q92499 740 aaKnown RBP17.69■□□□□ 0.42
UBXN1-201ENST00000294119 CLDN23Q96B33 292 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 ZNF707Q96C28 371 aaPredicted RBP17.69■□□□□ 0.42
UBXN1-201ENST00000294119 FAM126AQ9BYI3 521 aaPredicted RBP17.69■□□□□ 0.42
UBXN1-201ENST00000294119 LAMA1P25391 3075 aa17.69■□□□□ 0.42
UBXN1-201ENST00000294119 COL1A2P08123 1366 aa17.68■□□□□ 0.42
UBXN1-201ENST00000294119 SOBPA7XYQ1 873 aa17.68■□□□□ 0.42
UBXN1-201ENST00000294119 IFIT3O14879 490 aaKnown RBP17.68■□□□□ 0.42
UBXN1-201ENST00000294119 LAMA5O15230 3695 aa17.68■□□□□ 0.42
UBXN1-201ENST00000294119 PRKCQQ04759 706 aa17.68■□□□□ 0.42
UBXN1-201ENST00000294119 MTMR1Q13613 665 aa17.68■□□□□ 0.42
UBXN1-201ENST00000294119 BECN1Q14457 450 aa17.68■□□□□ 0.42
UBXN1-201ENST00000294119 CYB5R4Q7L1T6 521 aa17.68■□□□□ 0.42
UBXN1-201ENST00000294119 RSPH1Q8WYR4 309 aa17.68■□□□□ 0.42
UBXN1-201ENST00000294119 JADE2Q9NQC1 790 aa17.68■□□□□ 0.42
UBXN1-201ENST00000294119 SLC9A2Q9UBY0 812 aa17.68■□□□□ 0.42
UBXN1-201ENST00000294119 NUMBLQ9Y6R0 609 aa17.68■□□□□ 0.42
UBXN1-201ENST00000294119 FLNBO75369 2602 aaKnown RBP17.68■□□□□ 0.42
UBXN1-201ENST00000294119 CCDC195A0A1B0GUA6 201 aa17.67■□□□□ 0.42
UBXN1-201ENST00000294119 TM4SF5O14894 197 aa17.67■□□□□ 0.42
UBXN1-201ENST00000294119 GALTP07902 379 aa17.67■□□□□ 0.42
UBXN1-201ENST00000294119 LIFRP42702 1097 aa17.67■□□□□ 0.42
UBXN1-201ENST00000294119 ACTR2P61160 394 aa17.67■□□□□ 0.42
UBXN1-201ENST00000294119 GRM4Q14833 912 aa17.67■□□□□ 0.42
UBXN1-201ENST00000294119 LAIR1Q6GTX8 287 aa17.67■□□□□ 0.42
UBXN1-201ENST00000294119 RSPO2Q6UXX9 243 aaPredicted RBP17.67■□□□□ 0.42
UBXN1-201ENST00000294119 BBXQ8WY36 941 aaPredicted RBP17.67■□□□□ 0.42
UBXN1-201ENST00000294119 RPP25Q9BUL9 199 aaKnown RBP17.67■□□□□ 0.42
UBXN1-201ENST00000294119 EMILIN2Q9BXX0 1053 aa17.67■□□□□ 0.42
UBXN1-201ENST00000294119 AGXT2Q9BYV1 514 aa17.67■□□□□ 0.42
UBXN1-201ENST00000294119 MAN1C1Q9NR34 630 aa17.67■□□□□ 0.42
UBXN1-201ENST00000294119 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.67■□□□□ 0.42
UBXN1-201ENST00000294119 HBP1O60381 514 aa17.66■□□□□ 0.42
UBXN1-201ENST00000294119 KLRC2P26717 231 aa17.66■□□□□ 0.42
UBXN1-201ENST00000294119 GPC5P78333 572 aa17.66■□□□□ 0.42
UBXN1-201ENST00000294119 MLF2Q15773 248 aaPredicted RBP17.66■□□□□ 0.42
UBXN1-201ENST00000294119 TSSK4Q6SA08 328 aa17.66■□□□□ 0.42
UBXN1-201ENST00000294119 KDF1Q8NAX2 398 aaPredicted RBP17.66■□□□□ 0.42
UBXN1-201ENST00000294119 SMARCC2Q8TAQ2 1214 aa17.66■□□□□ 0.42
UBXN1-201ENST00000294119 ZSCAN31Q96LW9 406 aaPredicted RBP17.66■□□□□ 0.42
UBXN1-201ENST00000294119 NRDE2Q9H7Z3 1164 aa17.66■□□□□ 0.42
UBXN1-201ENST00000294119 LTB4R2Q9NPC1 389 aa17.66■□□□□ 0.42
UBXN1-201ENST00000294119 SEMA4GQ9NTN9 838 aa17.66■□□□□ 0.42
UBXN1-201ENST00000294119 PKD2L1Q9P0L9 805 aa17.66■□□□□ 0.42
UBXN1-201ENST00000294119 ZMIZ1Q9ULJ6 1067 aa17.66■□□□□ 0.42
UBXN1-201ENST00000294119 NFASCO94856 1347 aa17.66■□□□□ 0.42
UBXN1-201ENST00000294119 INPPL1O15357 1258 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 ZC3H11AO75152 810 aaKnown RBP eCLIP17.65■□□□□ 0.42
UBXN1-201ENST00000294119 C22orf31O95567 290 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 RETP07949 1114 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 RPS9P46781 194 aaKnown RBP17.65■□□□□ 0.42
UBXN1-201ENST00000294119 ANTXR2P58335 489 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 FZD5Q13467 585 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 SNW1Q13573 536 aaKnown RBP17.65■□□□□ 0.42
UBXN1-201ENST00000294119 CSRP2Q16527 193 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 PRR23CQ6ZRP0 262 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 Q6ZUG5 572 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 HSCBQ8IWL3 235 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 IGDCC4Q8TDY8 1250 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 PPP1R16BQ96T49 567 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 ADAMTS10Q9H324 1103 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 LIMCH1Q9UPQ0 1083 aa17.65■□□□□ 0.42
UBXN1-201ENST00000294119 SPDYE4A6NLX3 237 aa17.64■□□□□ 0.41
UBXN1-201ENST00000294119 FAM170BA6NMN3 283 aa17.64■□□□□ 0.41
UBXN1-201ENST00000294119 GDF9O60383 454 aa17.64■□□□□ 0.41
UBXN1-201ENST00000294119 VTNP04004 478 aa17.64■□□□□ 0.41
UBXN1-201ENST00000294119 CPA1P15085 419 aa17.64■□□□□ 0.41
UBXN1-201ENST00000294119 ZSCAN20P17040 1043 aaPredicted RBP17.64■□□□□ 0.41
UBXN1-201ENST00000294119 ZNF484Q5JVG2 852 aa17.64■□□□□ 0.41
UBXN1-201ENST00000294119 LINC01465Q8N7H1 131 aa17.64■□□□□ 0.41
UBXN1-201ENST00000294119 FGF14Q92915 247 aa17.64■□□□□ 0.41
UBXN1-201ENST00000294119 STK39Q9UEW8 545 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms