RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 NLRP4Q96MN2 994 aa19.58■□□□□ 0.72
CCDC78-201ENST00000293889 ST6GALNAC4Q9H4F1 302 aa19.58■□□□□ 0.72
CCDC78-201ENST00000293889 ARHGAP28Q9P2N2 729 aa19.58■□□□□ 0.72
CCDC78-201ENST00000293889 DACH1Q9UI36 760 aa19.58■□□□□ 0.72
CCDC78-201ENST00000293889 PPP1R37O75864 691 aa19.57■□□□□ 0.72
CCDC78-201ENST00000293889 PRPF6O94906 941 aaKnown RBP19.57■□□□□ 0.72
CCDC78-201ENST00000293889 HOXD13P35453 343 aa19.57■□□□□ 0.72
CCDC78-201ENST00000293889 TAF2Q6P1X5 1199 aa19.57■□□□□ 0.72
CCDC78-201ENST00000293889 ZNF507Q8TCN5 953 aa19.57■□□□□ 0.72
CCDC78-201ENST00000293889 PPP1R16BQ96T49 567 aa19.57■□□□□ 0.72
CCDC78-201ENST00000293889 HTATIP2Q9BUP3 242 aa19.57■□□□□ 0.72
CCDC78-201ENST00000293889 TRPV6Q9H1D0 765 aa19.57■□□□□ 0.72
CCDC78-201ENST00000293889 PCDHB13Q9Y5F0 798 aa19.57■□□□□ 0.72
CCDC78-201ENST00000293889 EIF3DO15371 548 aaKnown RBP eCLIP19.56■□□□□ 0.72
CCDC78-201ENST00000293889 GTF2BQ00403 316 aa19.56■□□□□ 0.72
CCDC78-201ENST00000293889 KCNA1Q09470 495 aa19.56■□□□□ 0.72
CCDC78-201ENST00000293889 TMEM62Q0P6H9 643 aa19.56■□□□□ 0.72
CCDC78-201ENST00000293889 STIM1Q13586 685 aa19.56■□□□□ 0.72
CCDC78-201ENST00000293889 TFDP1Q14186 410 aa19.56■□□□□ 0.72
CCDC78-201ENST00000293889 BMT2Q1RMZ1 405 aa19.56■□□□□ 0.72
CCDC78-201ENST00000293889 STXBP4Q6ZWJ1 553 aa19.56■□□□□ 0.72
CCDC78-201ENST00000293889 WNT8BQ93098 351 aa19.56■□□□□ 0.72
CCDC78-201ENST00000293889 SEZ6LQ9BYH1 1024 aa19.56■□□□□ 0.72
CCDC78-201ENST00000293889 ATP11BQ9Y2G3 1177 aa19.56■□□□□ 0.72
CCDC78-201ENST00000293889 DENND3A2RUS2 1198 aa19.55■□□□□ 0.72
CCDC78-201ENST00000293889 B4GALT4O60513 344 aa19.55■□□□□ 0.72
CCDC78-201ENST00000293889 PPP1R2P41236 205 aa19.55■□□□□ 0.72
CCDC78-201ENST00000293889 GPC3P51654 580 aa19.55■□□□□ 0.72
CCDC78-201ENST00000293889 NLRP11P59045 1033 aaKnown RBP19.55■□□□□ 0.72
CCDC78-201ENST00000293889 ALCAMQ13740 583 aa19.55■□□□□ 0.72
CCDC78-201ENST00000293889 CDCA2Q69YH5 1023 aaPredicted RBP19.55■□□□□ 0.72
CCDC78-201ENST00000293889 NELFCDQ8IXH7 590 aa19.55■□□□□ 0.72
CCDC78-201ENST00000293889 NELFBQ8WX92 580 aa19.55■□□□□ 0.72
CCDC78-201ENST00000293889 DHTKD1Q96HY7 919 aaPredicted RBP19.55■□□□□ 0.72
CCDC78-201ENST00000293889 NAT10Q9H0A0 1025 aaKnown RBP19.55■□□□□ 0.72
CCDC78-201ENST00000293889 ADAMTS10Q9H324 1103 aa19.55■□□□□ 0.72
CCDC78-201ENST00000293889 CTNND2Q9UQB3 1225 aa19.55■□□□□ 0.72
CCDC78-201ENST00000293889 NOD1Q9Y239 953 aa19.55■□□□□ 0.72
CCDC78-201ENST00000293889 A0A087WZ62 844 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 H0YCG3 227 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 PSMA7O14818 248 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 GPR32O75388 356 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 KIF20AO95235 890 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 ERCC5P28715 1186 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-201ENST00000293889 ZNF165P49910 485 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 TLE2Q04725 743 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 POU5F1BQ06416 359 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 PTK7Q13308 1070 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 KIZQ2M2Z5 673 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 CT47A1Q5JQC4 288 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-201ENST00000293889 TAS1R3Q7RTX0 852 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 ANKRD33Q7Z3H0 272 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 NME8Q8N427 588 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 NLRP7Q8WX94 980 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 MED15Q96RN5 788 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 FDXACB1Q9BRP7 624 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-201ENST00000293889 IFT122Q9HBG6 1241 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 TBX20Q9UMR3 447 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 UBE4BO95155 1302 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 PQBP1O60828 265 aaKnown RBP19.54■□□□□ 0.72
CCDC78-201ENST00000293889 CAVIN2O95810 425 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 STX17P56962 302 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 PTENP60484 403 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 CDC42EP1Q00587 391 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 PAK1Q13153 545 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 KNOP1Q1ED39 458 aaKnown RBP19.54■□□□□ 0.72
CCDC78-201ENST00000293889 ZNF410Q86VK4 478 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 FAM126BQ8IXS8 530 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 DHX38Q92620 1227 aaKnown RBP19.54■□□□□ 0.72
CCDC78-201ENST00000293889 KCNN1Q92952 543 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 C2orf40Q9H1Z8 148 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 SEMA6BQ9H3T3 888 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 CDHR5Q9HBB8 845 aa19.54■□□□□ 0.72
CCDC78-201ENST00000293889 PDE4DIPQ5VU43 2346 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 K7ERI5 159 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 PHKA2P46019 1235 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 EFNA5P52803 228 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 PMS1P54277 932 aaKnown RBP19.53■□□□□ 0.72
CCDC78-201ENST00000293889 MLLT1Q03111 559 aaPredicted RBP19.53■□□□□ 0.72
CCDC78-201ENST00000293889 RPAINQ86UA6 219 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 RSPH3Q86UC2 560 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 ZBTB8OSQ8IWT0 167 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 DPF3Q92784 378 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 P2RX5Q93086 422 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 HVCN1Q96D96 273 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 SCLT1Q96NL6 688 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 ACCSQ96QU6 501 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 BPIFA3Q9BQP9 254 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 NFKBIZQ9BYH8 718 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 IKZF4Q9H2S9 585 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 KCTD10Q9H3F6 313 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 TMEM134Q9H6X4 195 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 CBX8Q9HC52 389 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 RWDD2AQ9UIY3 292 aa19.53■□□□□ 0.72
CCDC78-201ENST00000293889 CD4P01730 458 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 SCP2P22307 547 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 CCNE1P24864 410 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 ABCD1P33897 745 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 CENPPQ6IPU0 288 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 IFNLR1Q8IU57 520 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms