RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 GPR162Q16538 588 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 PHLDB3Q6NSJ2 640 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 PRPF38AQ8NAV1 312 aaKnown RBP16.35■□□□□ 0.21
CCDC116-201ENST00000292779 PROCA1Q8NCQ7 364 aaPredicted RBP16.35■□□□□ 0.21
CCDC116-201ENST00000292779 CLEC4DQ8WXI8 215 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 PIK3R5Q8WYR1 880 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 HES6Q96HZ4 224 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 CALR3Q96L12 384 aaKnown RBP16.35■□□□□ 0.21
CCDC116-201ENST00000292779 PCIF1Q9H4Z3 704 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 TAF1DQ9H5J8 278 aaPredicted RBP16.35■□□□□ 0.21
CCDC116-201ENST00000292779 NCANO14594 1321 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 IGSF9BQ9UPX0 1349 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 ZNF233A6NK53 670 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 BUB1BO60566 1050 aaPredicted RBP16.35■□□□□ 0.21
CCDC116-201ENST00000292779 P4HBP07237 508 aaKnown RBP16.35■□□□□ 0.21
CCDC116-201ENST00000292779 SRLQ86TD4 932 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 RASGEF1CQ8N431 466 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 LMO3Q8TAP4 145 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 DDX47Q9H0S4 455 aaKnown RBP16.35■□□□□ 0.21
CCDC116-201ENST00000292779 ISCUQ9H1K1 167 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 HOMER2Q9NSB8 354 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 RSPH14Q9UHP6 348 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 ZHX2Q9Y6X8 837 aa16.35■□□□□ 0.21
CCDC116-201ENST00000292779 KRIT1O00522 736 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 SART1O43290 800 aaKnown RBP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 PPFIA4O75335 1185 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 CLSTN1O94985 981 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 TMEM253P0C7T8 217 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 ALAS1P13196 640 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 ITGA4P13612 1032 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 IRAK1P51617 712 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 ITGB3BPQ13352 177 aaPredicted RBP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 DNAJC21Q5F1R6 531 aaKnown RBP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 RFFLQ8WZ73 363 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 CAPS2Q9BXY5 557 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 LARSQ9P2J5 1176 aaKnown RBP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 RRP15Q9Y3B9 282 aaKnown RBP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 SAMM50Q9Y512 469 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 FOXN3O00409 490 aaPredicted RBP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 LRRN2O75325 713 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 CCDC172P0C7W6 258 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 KRT13P13646 458 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 TNFAIP3P21580 790 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 ECHS1P30084 290 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 IRX5P78411 483 aaPredicted RBP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 MYBPC2Q14324 1141 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 HLTFQ14527 1009 aaKnown RBP eCLIP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 TKFCQ3LXA3 575 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 ANGEL2Q5VTE6 544 aaKnown RBP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 PALB2Q86YC2 1186 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 CTNNBL1Q8WYA6 563 aaPredicted RBP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 RAVER2Q9HCJ3 691 aaKnown RBP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 AGO4Q9HCK5 861 aaKnown RBP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 SEPT11Q9NVA2 429 aaKnown RBP16.34■□□□□ 0.21
CCDC116-201ENST00000292779 TAS2R14Q9NYV8 317 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 AMFRQ9UKV5 643 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 EMSYQ7Z589 1322 aa16.34■□□□□ 0.21
CCDC116-201ENST00000292779 RARRES1P49788 294 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 MRPS9P82933 396 aaKnown RBP16.33■□□□□ 0.2
CCDC116-201ENST00000292779 KIF22Q14807 665 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 KCTD16Q68DU8 428 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 DDX42Q86XP3 938 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCDC116-201ENST00000292779 SH2D3CQ8N5H7 860 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 ARHGEF26Q96DR7 871 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 SH2D3AQ9BRG2 576 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 PPP1R9AQ9ULJ8 1098 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 CCDC188H7C350 402 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 WDR46O15213 610 aaKnown RBP16.33■□□□□ 0.2
CCDC116-201ENST00000292779 HSPA9P38646 679 aaKnown RBP16.33■□□□□ 0.2
CCDC116-201ENST00000292779 PPATQ06203 517 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 KCTD19Q17RG1 926 aaPredicted RBP16.33■□□□□ 0.2
CCDC116-201ENST00000292779 NBPF12Q5TAG4 269 aaPredicted RBP16.33■□□□□ 0.2
CCDC116-201ENST00000292779 NIPA1Q7RTP0 329 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 FMNL3Q8IVF7 1028 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 CBWD1Q9BRT8 395 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 THAP2Q9H0W7 228 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 TMEM206Q9H813 350 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 DBR1Q9UK59 544 aaKnown RBP16.33■□□□□ 0.2
CCDC116-201ENST00000292779 UBIAD1Q9Y5Z9 338 aa16.33■□□□□ 0.2
CCDC116-201ENST00000292779 BHMG1C9JSJ3 638 aaPredicted RBP16.32■□□□□ 0.2
CCDC116-201ENST00000292779 MYO1CO00159 1063 aa16.32■□□□□ 0.2
CCDC116-201ENST00000292779 QARSP47897 775 aaKnown RBP16.32■□□□□ 0.2
CCDC116-201ENST00000292779 VAMP7P51809 220 aa16.32■□□□□ 0.2
CCDC116-201ENST00000292779 GNGT1P63211 74 aa16.32■□□□□ 0.2
CCDC116-201ENST00000292779 PPP3CAQ08209 521 aa16.32■□□□□ 0.2
CCDC116-201ENST00000292779 SPP2Q13103 211 aa16.32■□□□□ 0.2
CCDC116-201ENST00000292779 CUL1Q13616 776 aa16.32■□□□□ 0.2
CCDC116-201ENST00000292779 SKIDA1Q1XH10 827 aa16.32■□□□□ 0.2
CCDC116-201ENST00000292779 PCNX4Q63HM2 1172 aa16.32■□□□□ 0.2
CCDC116-201ENST00000292779 TTC19Q6DKK2 380 aaPredicted RBP16.32■□□□□ 0.2
CCDC116-201ENST00000292779 INTS8Q75QN2 995 aaKnown RBP16.32■□□□□ 0.2
CCDC116-201ENST00000292779 MCF2L2Q86YR7 1114 aa16.32■□□□□ 0.2
CCDC116-201ENST00000292779 EIF1ADQ8N9N8 165 aaKnown RBP16.32■□□□□ 0.2
CCDC116-201ENST00000292779 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC116-201ENST00000292779 ACCSQ96QU6 501 aa16.32■□□□□ 0.2
CCDC116-201ENST00000292779 UBE2TQ9NPD8 197 aaPredicted RBP16.32■□□□□ 0.2
CCDC116-201ENST00000292779 AMACRQ9UHK6 382 aa16.32■□□□□ 0.2
CCDC116-201ENST00000292779 DAAM1Q9Y4D1 1078 aa16.32■□□□□ 0.2
CCDC116-201ENST00000292779 TMEM150BA6NC51 233 aa16.31■□□□□ 0.2
CCDC116-201ENST00000292779 MAPTP10636 758 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms