RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 STRIP1Q5VSL9 837 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 RHOT1Q8IXI2 618 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 NGRNQ9NPE2 291 aaKnown RBP13.66□□□□□ -0.22
PTCD1-201ENST00000292478 PPP1R9AQ9ULJ8 1098 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 DIP2CQ9Y2E4 1556 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 SRGAP2O75044 1071 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 ENTPD3O75355 529 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 CAMTA2O94983 1202 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 ACSL3O95573 720 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 ZNF18P17022 549 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 NFKBIAP25963 317 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 GUCY1A2P33402 732 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 TERF2Q15554 542 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 TKFCQ3LXA3 575 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 CRLF3Q8IUI8 442 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 POLR3FQ9H1D9 316 aaPredicted RBP13.66□□□□□ -0.22
PTCD1-201ENST00000292478 FAM8A1Q9UBU6 413 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 SSU72P8A0A1W2PR75 194 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 LMNAP02545 664 aaKnown RBP13.66□□□□□ -0.22
PTCD1-201ENST00000292478 TAC1P20366 129 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 STAT3P40763 770 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 SLC1A1P43005 524 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 ANKRD40Q6AI12 368 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 SPOPLQ6IQ16 392 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 HHIPL2Q6UWX4 724 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 CEMIPQ8WUJ3 1361 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 PP2D1A8MPX8 630 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 FTLP02792 175 aaPredicted RBP13.65□□□□□ -0.22
PTCD1-201ENST00000292478 KIAA1841Q6NSI8 718 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 SWSAP1Q6NVH7 229 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 TBC1D16Q8TBP0 767 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 DRC3Q9H069 523 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 COPEO14579 308 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 HUS1O60921 280 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 SRGNP10124 158 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 ESRRAP11474 423 aaPredicted RBP13.65□□□□□ -0.22
PTCD1-201ENST00000292478 GNA15P30679 374 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 FBXL13Q8NEE6 735 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 AGLP35573 1532 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 MMEP08473 750 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 ADCY1Q08828 1119 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 C16orf86Q6ZW13 317 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 PITPNM3Q9BZ71 974 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 ADAM21Q9UKJ8 722 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 FLT1P17948 1338 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 C4orf50Q6ZRC1 276 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 SYDE1Q6ZW31 735 aaPredicted RBP13.65□□□□□ -0.22
PTCD1-201ENST00000292478 LDHDQ86WU2 507 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 GDAP1Q8TB36 358 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 SKA2Q8WVK7 121 aaPredicted RBP13.65□□□□□ -0.22
PTCD1-201ENST00000292478 LPAR1Q92633 364 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 TRIM55Q9BYV6 548 aa13.65□□□□□ -0.22
PTCD1-201ENST00000292478 CHEK2O96017 543 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 FAM133BQ5BKY9 247 aaKnown RBP13.64□□□□□ -0.23
PTCD1-201ENST00000292478 NUGGCQ68CJ6 796 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 HAUS6Q7Z4H7 955 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 STAP1Q9ULZ2 295 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 DAGLAQ9Y4D2 1042 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 FOXN1O15353 648 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 SNRPFP62306 86 aaKnown RBP13.64□□□□□ -0.23
PTCD1-201ENST00000292478 WDR75Q8IWA0 830 aaKnown RBP13.64□□□□□ -0.23
PTCD1-201ENST00000292478 MCUQ8NE86 351 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 C11orf70Q9BRQ4 267 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 RTN2O75298 545 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 FCER1AP12319 257 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 SDC4P31431 198 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 RFX5P48382 616 aaPredicted RBP13.64□□□□□ -0.23
PTCD1-201ENST00000292478 LLGL1Q15334 1064 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 NFRKBQ6P4R8 1299 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 NDUFAF2Q8N183 169 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 GJD4Q96KN9 370 aaPredicted RBP13.64□□□□□ -0.23
PTCD1-201ENST00000292478 TMEM60Q9H2L4 133 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 ZFXP17010 805 aaPredicted RBP13.64□□□□□ -0.23
PTCD1-201ENST00000292478 PAPOLAP51003 745 aaKnown RBP13.64□□□□□ -0.23
PTCD1-201ENST00000292478 CDO1Q16878 200 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 Q3C1V9 767 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 AGPAT1Q99943 283 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 GGCXP38435 758 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 EDRF1Q3B7T1 1238 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 SNF8Q96H20 258 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 TRIM62Q9BVG3 475 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 PARVAQ9NVD7 372 aa13.64□□□□□ -0.23
PTCD1-201ENST00000292478 PACSIN2Q9UNF0 486 aaPredicted RBP13.64□□□□□ -0.23
PTCD1-201ENST00000292478 ASB14A6NK59 587 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 KPNA7A9QM74 516 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 SKIP12755 728 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 PPP2R2AP63151 447 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 C2orf69Q8N8R5 385 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 FAM49AQ9H0Q0 323 aaPredicted RBP13.63□□□□□ -0.23
PTCD1-201ENST00000292478 SLC9A2Q9UBY0 812 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 EMSYQ7Z589 1322 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 FAM196BA6NMK8 535 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 RASA4BC9J798 803 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 RASA4O43374 803 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 MYL3P08590 195 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 SPP2Q13103 211 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 VPS72Q15906 364 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 RASGRP2Q7LDG7 609 aa13.63□□□□□ -0.23
PTCD1-201ENST00000292478 CDKL3Q8IVW4 592 aaPredicted RBP13.63□□□□□ -0.23
PTCD1-201ENST00000292478 SCG3Q8WXD2 468 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms