RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 AGPAT5Q9NUQ2 364 aa29.74■■■□□ 2.35
SSU72-201ENST00000291386 PCDHA11Q9Y5I1 949 aa29.74■■■□□ 2.35
SSU72-201ENST00000291386 C9IYK1 514 aa29.73■■■□□ 2.35
SSU72-201ENST00000291386 FXR1P51114 621 aaKnown RBP eCLIP29.73■■■□□ 2.35
SSU72-201ENST00000291386 FAM189BP81408 668 aa29.73■■■□□ 2.35
SSU72-201ENST00000291386 GIT2Q14161 759 aa29.73■■■□□ 2.35
SSU72-201ENST00000291386 DHX8Q14562 1220 aaKnown RBP29.73■■■□□ 2.35
SSU72-201ENST00000291386 RAB30Q15771 203 aa29.73■■■□□ 2.35
SSU72-201ENST00000291386 PPP4R3CPQ6ZMV5 832 aa29.73■■■□□ 2.35
SSU72-201ENST00000291386 IQUBQ8NA54 791 aa29.73■■■□□ 2.35
SSU72-201ENST00000291386 IPO9Q96P70 1041 aaKnown RBP29.73■■■□□ 2.35
SSU72-201ENST00000291386 RNF216Q9NWF9 866 aaPredicted RBP29.73■■■□□ 2.35
SSU72-201ENST00000291386 DACT1Q9NYF0 836 aa29.73■■■□□ 2.35
SSU72-201ENST00000291386 A0A1W2PQ27 194 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 A0A1W2PQ64 194 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 A0A1W2PQD8 194 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 INO80B-WBP1J3KQ70 363 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 AXLP30530 894 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 SARSP49591 514 aaKnown RBP29.72■■■□□ 2.35
SSU72-201ENST00000291386 ZNF131P52739 623 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 DMP1Q13316 513 aaPredicted RBP29.72■■■□□ 2.35
SSU72-201ENST00000291386 AMHR2Q16671 573 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 FAM187BQ17R55 369 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 DEPTORQ8TB45 409 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 SPIRE2Q8WWL2 714 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 PRIMPOLQ96LW4 560 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 REEP2Q9BRK0 252 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 FZD8Q9H461 694 aa29.72■■■□□ 2.35
SSU72-201ENST00000291386 NPHP3-ACAD11A0A0J9YXS1 232 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 FAM237AA0A1B0GTK4 181 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 PLS3P13797 630 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 NPTX2P47972 431 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 EFNA5P52803 228 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 PEX3P56589 373 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 HTRA4P83105 476 aaPredicted RBP29.71■■■□□ 2.35
SSU72-201ENST00000291386 RAD51AP2Q09MP3 1159 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 TMCO2Q7Z6W1 182 aaPredicted RBP29.71■■■□□ 2.35
SSU72-201ENST00000291386 NPAS4Q8IUM7 802 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 LRCH3Q96II8 777 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 ELAC1Q9H777 363 aaKnown RBP29.71■■■□□ 2.35
SSU72-201ENST00000291386 GDPD2Q9HCC8 539 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 PRMT7Q9NVM4 692 aaPredicted RBP29.71■■■□□ 2.35
SSU72-201ENST00000291386 MSRAQ9UJ68 235 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 KCNH3Q9ULD8 1083 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 LAMA3Q16787 3333 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 ADGRA3Q8IWK6 1321 aa29.71■■■□□ 2.35
SSU72-201ENST00000291386 TSPAN1O60635 241 aa29.7■■■□□ 2.35
SSU72-201ENST00000291386 ERLIN2O94905 339 aa29.7■■■□□ 2.35
SSU72-201ENST00000291386 HOXA11P31270 313 aaPredicted RBP29.7■■■□□ 2.35
SSU72-201ENST00000291386 RABGGTBP53611 331 aa29.7■■■□□ 2.35
SSU72-201ENST00000291386 KCNN1Q92952 543 aa29.7■■■□□ 2.35
SSU72-201ENST00000291386 RAD9AQ99638 391 aa29.7■■■□□ 2.35
SSU72-201ENST00000291386 CCDC113Q9H0I3 377 aa29.7■■■□□ 2.35
SSU72-201ENST00000291386 TNMDQ9H2S6 317 aa29.7■■■□□ 2.35
SSU72-201ENST00000291386 MAGEF1Q9HAY2 307 aa29.7■■■□□ 2.35
SSU72-201ENST00000291386 KBTBD4Q9NVX7 518 aa29.7■■■□□ 2.35
SSU72-201ENST00000291386 LARSQ9P2J5 1176 aaKnown RBP29.7■■■□□ 2.35
SSU72-201ENST00000291386 PIN4Q9Y237 131 aaKnown RBP29.7■■■□□ 2.35
SSU72-201ENST00000291386 HPSEQ9Y251 543 aa29.7■■■□□ 2.35
SSU72-201ENST00000291386 PHLPP2Q6ZVD8 1323 aa29.7■■■□□ 2.34
SSU72-201ENST00000291386 TMEM265A0A087WTH1 108 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 MYMKA6NI61 221 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 SFI1A8K8P3 1242 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 POLR2DO15514 142 aaKnown RBP29.69■■■□□ 2.34
SSU72-201ENST00000291386 STAG3L1P0CL83 205 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 DNAJB2P25686 324 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 PBX2P40425 430 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 CACNB1Q02641 598 aaPredicted RBP29.69■■■□□ 2.34
SSU72-201ENST00000291386 NCBP1Q09161 790 aaKnown RBP29.69■■■□□ 2.34
SSU72-201ENST00000291386 DHX58Q96C10 678 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 ZBED2Q9BTP6 218 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 LRRC27Q9C0I9 530 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 TMEM134Q9H6X4 195 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 ARHGAP28Q9P2N2 729 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 INSL6Q9Y581 213 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 COL4A6Q14031 1691 aa29.69■■■□□ 2.34
SSU72-201ENST00000291386 A0A0U1RQF3 1178 aa29.68■■■□□ 2.34
SSU72-201ENST00000291386 TLL1O43897 1013 aa29.68■■■□□ 2.34
SSU72-201ENST00000291386 KRT18P05783 430 aaKnown RBP29.68■■■□□ 2.34
SSU72-201ENST00000291386 DDX12PQ92771 950 aa29.68■■■□□ 2.34
SSU72-201ENST00000291386 CCDC51Q96ER9 411 aa29.68■■■□□ 2.34
SSU72-201ENST00000291386 KMT5AQ9NQR1 393 aa29.68■■■□□ 2.34
SSU72-201ENST00000291386 YBX2Q9Y2T7 364 aaKnown RBP29.68■■■□□ 2.34
SSU72-201ENST00000291386 CCDC169A6NNP5 214 aa29.67■■■□□ 2.34
SSU72-201ENST00000291386 PFKFB1P16118 471 aa29.67■■■□□ 2.34
SSU72-201ENST00000291386 SMTNP53814 917 aa29.67■■■□□ 2.34
SSU72-201ENST00000291386 MAPK6Q16659 721 aa29.67■■■□□ 2.34
SSU72-201ENST00000291386 DNAJC19Q96DA6 116 aa29.67■■■□□ 2.34
SSU72-201ENST00000291386 KIFC3Q9BVG8 833 aa29.67■■■□□ 2.34
SSU72-201ENST00000291386 RC3H2Q9HBD1 1191 aaKnown RBP29.67■■■□□ 2.34
SSU72-201ENST00000291386 PARVGQ9HBI0 331 aa29.67■■■□□ 2.34
SSU72-201ENST00000291386 TMEM161AQ9NX61 479 aa29.67■■■□□ 2.34
SSU72-201ENST00000291386 A0A1B0GVL5 298 aa29.66■■■□□ 2.34
SSU72-201ENST00000291386 ACKR2O00590 384 aa29.66■■■□□ 2.34
SSU72-201ENST00000291386 FAM13AO94988 1023 aa29.66■■■□□ 2.34
SSU72-201ENST00000291386 UPP2O95045 317 aa29.66■■■□□ 2.34
SSU72-201ENST00000291386 SKIP12755 728 aa29.66■■■□□ 2.34
SSU72-201ENST00000291386 ARF4P18085 180 aaPredicted RBP29.66■■■□□ 2.34
SSU72-201ENST00000291386 SCP2P22307 547 aa29.66■■■□□ 2.34
SSU72-201ENST00000291386 TWF2Q6IBS0 349 aaKnown RBP29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms