RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 ADHFE1Q8IWW8 467 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 ABI1Q8IZP0 508 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 MRPS27Q92552 414 aaKnown RBP10.66□□□□□ -0.7
HMHB1-201ENST00000289448 ZNF558Q96NG5 402 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 JPH2Q9BR39 696 aaPredicted RBP10.66□□□□□ -0.7
HMHB1-201ENST00000289448 LRFN3Q9BTN0 628 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 TLE6Q9H808 572 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 TTC12Q9H892 705 aaPredicted RBP10.66□□□□□ -0.7
HMHB1-201ENST00000289448 FAM105AQ9NUU6 356 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 DACT1Q9NYF0 836 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 PCDHA12Q9UN75 941 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 LZTS1Q9Y250 596 aa10.66□□□□□ -0.7
HMHB1-201ENST00000289448 PIEZO1Q92508 2521 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 NT5C1B-RDH14C9J2C7 533 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 B4GALT3O60512 393 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 NEMFO60524 1076 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 ZNF623O75123 536 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 OFD1O75665 1012 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 LYPLA2O95372 231 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 ATP2B1P20020 1258 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 AFF1P51825 1210 aaKnown RBP10.65□□□□□ -0.7
HMHB1-201ENST00000289448 COASYQ13057 564 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 KCNC3Q14003 757 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 TRIM29Q14134 588 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 DUSP6Q16828 381 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 UBXN11Q5T124 520 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 OTUD6AQ7L8S5 288 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 FERMT3Q86UX7 667 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 TMEM173Q86WV6 379 aaPredicted RBP10.65□□□□□ -0.7
HMHB1-201ENST00000289448 SLC39A11Q8N1S5 342 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 SMRP1Q8NCR6 262 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 PSPC1Q8WXF1 523 aaKnown RBP10.65□□□□□ -0.7
HMHB1-201ENST00000289448 PPP2R3CQ969Q6 453 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 TCF25Q9BQ70 676 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 INO80BQ9C086 356 aaPredicted RBP10.65□□□□□ -0.7
HMHB1-201ENST00000289448 AGPAT5Q9NUQ2 364 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 SPG21Q9NZD8 308 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 PRKAG3Q9UGI9 489 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 FAM50BQ9Y247 325 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 PPME1Q9Y570 386 aa10.65□□□□□ -0.7
HMHB1-201ENST00000289448 POTEMA6NI47 508 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 EIF5BO60841 1220 aaKnown RBP10.64□□□□□ -0.71
HMHB1-201ENST00000289448 GPR37L1O60883 481 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 SPATA31C1P0DKV0 1188 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 MCM7P33993 719 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 PPM1AP35813 382 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 BCAR1P56945 870 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 TMEM31Q5JXX7 168 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 AGMOQ6ZNB7 445 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 SRGAP1Q7Z6B7 1085 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 RNF149Q8NC42 400 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 ASAP3Q8TDY4 903 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 PIGOQ8TEQ8 1089 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 BCL7CQ8WUZ0 217 aaPredicted RBP10.64□□□□□ -0.71
HMHB1-201ENST00000289448 NRDE2Q9H7Z3 1164 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 TBC1D13Q9NVG8 400 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 PUF60Q9UHX1 559 aaKnown RBP10.64□□□□□ -0.71
HMHB1-201ENST00000289448 PCDHB2Q9Y5E7 798 aa10.64□□□□□ -0.71
HMHB1-201ENST00000289448 ASAP2O43150 1006 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 GAS2O43903 313 aaKnown RBP10.63□□□□□ -0.71
HMHB1-201ENST00000289448 ARL2P36404 184 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 RARRES1P49788 294 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 PTENP60484 403 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 KRT17Q04695 432 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 CAPSQ13938 189 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 ZNF174Q15697 407 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 AMHR2Q16671 573 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 NOMO2Q5JPE7 1267 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 PDE12Q6L8Q7 609 aaKnown RBP10.63□□□□□ -0.71
HMHB1-201ENST00000289448 SYCE2Q6PIF2 218 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 GLB1LQ6UWU2 654 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 TMC7Q7Z402 723 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 MRPL10Q7Z7H8 261 aaKnown RBP10.63□□□□□ -0.71
HMHB1-201ENST00000289448 ZNF280BQ86YH2 543 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 EXOC8Q8IYI6 725 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 MRPL43Q8N983 215 aaKnown RBP10.63□□□□□ -0.71
HMHB1-201ENST00000289448 TCP11Q8WWU5 503 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 C8orf76Q96K31 380 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 CDCA3Q99618 268 aaPredicted RBP10.63□□□□□ -0.71
HMHB1-201ENST00000289448 MTRQ99707 1265 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 LLPHQ9BRT6 129 aaKnown RBP10.63□□□□□ -0.71
HMHB1-201ENST00000289448 VN1R3Q9BXE9 311 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 MRPL9Q9BYD2 267 aaKnown RBP10.63□□□□□ -0.71
HMHB1-201ENST00000289448 S1PR5Q9H228 398 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 RNF39Q9H2S5 420 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 ENTPD7Q9NQZ7 604 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 ANKEF1Q9NU02 776 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 DNAJB4Q9UDY4 337 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 INPP5FQ9Y2H2 1132 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 USP15Q9Y4E8 981 aaPredicted RBP10.63□□□□□ -0.71
HMHB1-201ENST00000289448 ZDBF2Q9HCK1 2354 aa10.63□□□□□ -0.71
HMHB1-201ENST00000289448 C2orf71A6NGG8 1288 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 TSPAN1O60635 241 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 ZC3H11AO75152 810 aaKnown RBP eCLIP10.62□□□□□ -0.71
HMHB1-201ENST00000289448 MED24O75448 989 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 DDHD2O94830 711 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 GALTP07902 379 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 SKIP12755 728 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 GLRA2P23416 452 aa10.62□□□□□ -0.71
HMHB1-201ENST00000289448 SLC11A1P49279 550 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms