RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 METTL13Q8N6R0 699 aa18.69■□□□□ 0.58
PCDHA13-201ENST00000289272 ZNF577Q9BSK1 485 aa18.69■□□□□ 0.58
PCDHA13-201ENST00000289272 SAYSD1Q9NPB0 183 aa18.69■□□□□ 0.58
PCDHA13-201ENST00000289272 MED7O43513 233 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 VHLP40337 213 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 TMPRSS15P98073 1019 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 TBCCQ15814 346 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 KAZNQ674X7 775 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 PPP1R18Q6NYC8 613 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 BZW1Q7L1Q6 419 aaKnown RBP18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 ZNF512BQ96KM6 892 aaPredicted RBP18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 PIM2Q9P1W9 311 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 KPNA7A9QM74 516 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 ATP2C1P98194 919 aaPredicted RBP18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 GFPT1Q06210 699 aaPredicted RBP18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 TMEM154Q6P9G4 183 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 SPICE1Q8N0Z3 855 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 C1orf167Q5SNV9 1468 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 CLRN2A0PK11 232 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 CHN1P15882 459 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 GRM4Q14833 912 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 TOM1L1O75674 476 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 KCNA3P22001 575 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 ZIM3Q96PE6 472 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 FBXO2Q9UK22 296 aaPredicted RBP18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
PCDHA13-201ENST00000289272 ORC4O43929 436 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 ECM2O94769 699 aaPredicted RBP18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 MARK3P27448 753 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 TRAPPC11Q7Z392 1133 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 COL23A1Q86Y22 540 aaPredicted RBP18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 ENGASEQ8NFI3 743 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 NMT2O60551 498 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 PIK3CAP42336 1068 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 PDIA6Q15084 440 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 RIOK1Q9BRS2 568 aaKnown RBP18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 GGA2Q9UJY4 613 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 CDH16O75309 829 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 INPP1P49441 399 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 CELF1Q92879 486 aaKnown RBP18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 KCNB2Q92953 911 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 FAM161BQ96MY7 647 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 GCOM2Q9BZD3 368 aaPredicted RBP18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 PREX1Q8TCU6 1659 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 TRIM49BA6NDI0 452 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 ASNSP08243 561 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 COPS2P61201 443 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 TBC1D23Q9NUY8 699 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 TLK1Q9UKI8 766 aa18.67■□□□□ 0.58
PCDHA13-201ENST00000289272 MEIS1O00470 390 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 CSF1RP07333 972 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 DLATP10515 647 aaKnown RBP18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 MXI1P50539 228 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 AP3B2Q13367 1082 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 KIAA1755Q5JYT7 1200 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 TTBK2Q6IQ55 1244 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 CAVIN3Q969G5 261 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 CYTH2Q99418 400 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 ANKFY1Q9P2R3 1169 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 SPATA31A6Q5VVP1 1343 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 A6NJR5 290 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 SH3BP5O60239 455 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 SNUPNO95149 360 aaKnown RBP18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 ECE1P42892 770 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 HSPA13P48723 471 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 DNAJC24Q6P3W2 148 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 FAM47EQ6ZV65 393 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 SLC7A3Q8WY07 619 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 ANO3Q9BYT9 981 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 PARVGQ9HBI0 331 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 UBE2TQ9NPD8 197 aaPredicted RBP18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 FOXN1O15353 648 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 MTF1Q14872 753 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 SLC18A3Q16572 532 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 RAD9BQ6WBX8 426 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 ACAD11Q709F0 780 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 NACA2Q9H009 215 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 PNMA3Q9UL41 463 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 AFG3L2Q9Y4W6 797 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 TAF6LQ9Y6J9 622 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 PPLO60437 1756 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 MROH2AA6NES4 1674 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 CLIC2O15247 247 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 TMEM191BP0C7N4 346 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 KRT10P13645 584 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 CDK17Q00537 523 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 YTHDF3Q7Z739 585 aaKnown RBP18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 DPP9Q86TI2 863 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 ATP11CQ8NB49 1132 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 MYCBPAPQ8TBZ2 947 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 IGDCC4Q8TDY8 1250 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 GIPC2Q8TF65 315 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 DDX47Q9H0S4 455 aaKnown RBP18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 HESX1Q9UBX0 185 aa18.66■□□□□ 0.58
PCDHA13-201ENST00000289272 SMAPO00193 183 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 GDF11O95390 407 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 ITIH2P19823 946 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 KIRREL3Q8IZU9 778 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 SUGT1Q9Y2Z0 365 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 ITSN1Q15811 1721 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms