RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 REEP2Q9BRK0 252 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 ZBED2Q9BTP6 218 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 TIPINQ9BVW5 301 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 AGPAT5Q9NUQ2 364 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 PCDHA11Q9Y5I1 949 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 CDH23Q9H251 3354 aa21.97■■□□□ 1.11
TIMP4-201ENST00000287814 LCHNA4D1U4 455 aa21.97■■□□□ 1.11
TIMP4-201ENST00000287814 TLL1O43897 1013 aa21.97■■□□□ 1.11
TIMP4-201ENST00000287814 IBSPP21815 317 aaPredicted RBP21.97■■□□□ 1.11
TIMP4-201ENST00000287814 NPTX2P47972 431 aa21.97■■□□□ 1.11
TIMP4-201ENST00000287814 FAM189BP81408 668 aa21.97■■□□□ 1.11
TIMP4-201ENST00000287814 GIT2Q14161 759 aa21.97■■□□□ 1.11
TIMP4-201ENST00000287814 ADALQ6DHV7 355 aa21.97■■□□□ 1.11
TIMP4-201ENST00000287814 IFT74Q96LB3 600 aa21.97■■□□□ 1.11
TIMP4-201ENST00000287814 DRC1Q96MC2 740 aa21.97■■□□□ 1.11
TIMP4-201ENST00000287814 NKX2-4Q9H2Z4 354 aa21.97■■□□□ 1.11
TIMP4-201ENST00000287814 PIN4Q9Y237 131 aaKnown RBP21.97■■□□□ 1.11
TIMP4-201ENST00000287814 TTC3P53804 2025 aa21.97■■□□□ 1.11
TIMP4-201ENST00000287814 CHD9Q3L8U1 2897 aa21.96■■□□□ 1.11
TIMP4-201ENST00000287814 B4GALT5O43286 388 aa21.96■■□□□ 1.11
TIMP4-201ENST00000287814 TSPAN1O60635 241 aa21.96■■□□□ 1.11
TIMP4-201ENST00000287814 ZSCAN20P17040 1043 aaPredicted RBP21.96■■□□□ 1.11
TIMP4-201ENST00000287814 SARSP49591 514 aaKnown RBP21.96■■□□□ 1.11
TIMP4-201ENST00000287814 FAM43BQ6ZT52 329 aaPredicted RBP21.96■■□□□ 1.11
TIMP4-201ENST00000287814 DEPTORQ8TB45 409 aa21.96■■□□□ 1.11
TIMP4-201ENST00000287814 DHX58Q96C10 678 aa21.96■■□□□ 1.11
TIMP4-201ENST00000287814 RAD9AQ99638 391 aa21.96■■□□□ 1.11
TIMP4-201ENST00000287814 FZD8Q9H461 694 aa21.96■■□□□ 1.11
TIMP4-201ENST00000287814 CHST12Q9NRB3 414 aa21.96■■□□□ 1.11
TIMP4-201ENST00000287814 C1orf112Q9NSG2 853 aa21.96■■□□□ 1.11
TIMP4-201ENST00000287814 MSRAQ9UJ68 235 aa21.96■■□□□ 1.11
TIMP4-201ENST00000287814 USP20Q9Y2K6 914 aa21.96■■□□□ 1.11
TIMP4-201ENST00000287814 MYMKA6NI61 221 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 TTLL13PA6NNM8 815 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 EDN1P05305 212 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 HTRA4P83105 476 aaPredicted RBP21.95■■□□□ 1.1
TIMP4-201ENST00000287814 PPP2R5AQ15172 486 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 RAB30Q15771 203 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 TIFAQ96CG3 184 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 CCDC113Q9H0I3 377 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 GBF1Q92538 1859 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 CCDC169A6NNP5 214 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 POLR2DO15514 142 aaKnown RBP21.95■■□□□ 1.1
TIMP4-201ENST00000287814 CA3P07451 260 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 PLS3P13797 630 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 CMA1P23946 247 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 TPRNQ4KMQ1 711 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 SV2BQ7L1I2 683 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 DYMQ7RTS9 669 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 ZBTB8OSQ8IWT0 167 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 STAMQ92783 540 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 CPB2Q96IY4 423 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 TTYH1Q9H313 450 aaPredicted RBP21.95■■□□□ 1.1
TIMP4-201ENST00000287814 FAM13BQ9NYF5 915 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 CHMP5Q9NZZ3 219 aa21.95■■□□□ 1.1
TIMP4-201ENST00000287814 A0A1B0GVL5 298 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 ERLIN2O94905 339 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 ARF4P18085 180 aaPredicted RBP21.94■■□□□ 1.1
TIMP4-201ENST00000287814 UBXN11Q5T124 520 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 Q7L0L9 218 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 SPRED2Q7Z698 418 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 ECHDC2Q86YB7 292 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 NPAS4Q8IUM7 802 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 DDX12PQ92771 950 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 NTPCRQ9BSD7 190 aaKnown RBP21.94■■□□□ 1.1
TIMP4-201ENST00000287814 C2orf40Q9H1Z8 148 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 C17orf75Q9HAS0 396 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 KCNH3Q9ULD8 1083 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 ODF2LQ9ULJ1 636 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 INSL6Q9Y581 213 aa21.94■■□□□ 1.1
TIMP4-201ENST00000287814 A0A0U1RQF3 1178 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 SLC16A4O15374 487 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 DGKIO75912 1065 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 GATMP50440 423 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 ZNF131P52739 623 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 DMP1Q13316 513 aaPredicted RBP21.93■■□□□ 1.1
TIMP4-201ENST00000287814 PCBP1Q15365 356 aaKnown RBP eCLIP21.93■■□□□ 1.1
TIMP4-201ENST00000287814 TWF2Q6IBS0 349 aaKnown RBP21.93■■□□□ 1.1
TIMP4-201ENST00000287814 PPP4R3CPQ6ZMV5 832 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 TAS1R3Q7RTX0 852 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 IQUBQ8NA54 791 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 DNAJC19Q96DA6 116 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 TRAIPQ9BWF2 469 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 RC3H2Q9HBD1 1191 aaKnown RBP21.93■■□□□ 1.1
TIMP4-201ENST00000287814 KMT5AQ9NQR1 393 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 DACT1Q9NYF0 836 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 ARHGAP28Q9P2N2 729 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 CHD7Q9P2D1 2997 aa21.93■■□□□ 1.1
TIMP4-201ENST00000287814 KRT18P05783 430 aaKnown RBP21.92■■□□□ 1.1
TIMP4-201ENST00000287814 PFKFB1P16118 471 aa21.92■■□□□ 1.1
TIMP4-201ENST00000287814 ATF7P17544 494 aaPredicted RBP21.92■■□□□ 1.1
TIMP4-201ENST00000287814 LIG1P18858 919 aa21.92■■□□□ 1.1
TIMP4-201ENST00000287814 FAM187BQ17R55 369 aa21.92■■□□□ 1.1
TIMP4-201ENST00000287814 GPR153Q6NV75 609 aa21.92■■□□□ 1.1
TIMP4-201ENST00000287814 CDR2LQ86X02 465 aaPredicted RBP21.92■■□□□ 1.1
TIMP4-201ENST00000287814 SPIRE2Q8WWL2 714 aa21.92■■□□□ 1.1
TIMP4-201ENST00000287814 ZNF689Q96CS4 500 aaPredicted RBP21.92■■□□□ 1.1
TIMP4-201ENST00000287814 YME1L1Q96TA2 773 aa21.92■■□□□ 1.1
TIMP4-201ENST00000287814 KBTBD4Q9NVX7 518 aa21.92■■□□□ 1.1
TIMP4-201ENST00000287814 HPSEQ9Y251 543 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms