RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TSNAXIP1Q2TAA8 658 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 GPATCH11Q8N954 259 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 CCDC188H7C350 402 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 PSMC1P62191 440 aaKnown RBP19.82■□□□□ 0.76
PCDH1-201ENST00000287008 DRAP1Q14919 205 aaPredicted RBP19.82■□□□□ 0.76
PCDH1-201ENST00000287008 NOP9Q86U38 636 aaKnown RBP19.82■□□□□ 0.76
PCDH1-201ENST00000287008 ZNF609O15014 1411 aa19.82■□□□□ 0.76
PCDH1-201ENST00000287008 CEMIPQ8WUJ3 1361 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 CLGNO14967 610 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 MAFGO15525 162 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 ZMYND10O75800 440 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 MMEL1Q495T6 779 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 TMTC4Q5T4D3 741 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 TEX2Q8IWB9 1127 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 KLC2Q9H0B6 622 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 LRRC53A6NM62 1247 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 FGGP02679 453 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 CTSHP09668 335 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 DR1Q01658 176 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 IER5Q5VY09 327 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 ATG4CQ96DT6 458 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 SH2D3AQ9BRG2 576 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 STX1BP61266 288 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 SREBF2Q12772 1141 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 CENPUQ71F23 418 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 MID2Q9UJV3 735 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 E9PCH4 1651 aa19.81■□□□□ 0.76
PCDH1-201ENST00000287008 RARBP10826 455 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 KRT3P12035 628 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 SH2D4BQ5SQS7 431 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 PYROXD1Q8WU10 500 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 DHX38Q92620 1227 aaKnown RBP19.8■□□□□ 0.76
PCDH1-201ENST00000287008 CAPS2Q9BXY5 557 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 EMSYQ7Z589 1322 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 PDXKO00764 312 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 NEMP1O14524 444 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 KCTD16Q68DU8 428 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 PPP1R12CQ9BZL4 782 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 INTS2Q9H0H0 1204 aaKnown RBP19.8■□□□□ 0.76
PCDH1-201ENST00000287008 MAP3K20Q9NYL2 800 aaKnown RBP19.8■□□□□ 0.76
PCDH1-201ENST00000287008 PDS5AQ29RF7 1337 aaKnown RBP19.8■□□□□ 0.76
PCDH1-201ENST00000287008 GOLGA8QA0A0J9YX86 632 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 GOLGA8OA6NCC3 632 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 GOLGA8NF8WBI6 632 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 SART1O43290 800 aaKnown RBP19.8■□□□□ 0.76
PCDH1-201ENST00000287008 SOX5P35711 763 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 SPOPLQ6IQ16 392 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 LMNTD2Q8IXW0 634 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.8■□□□□ 0.76
PCDH1-201ENST00000287008 FMO2Q99518 471 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 NMT1P30419 496 aaKnown RBP19.8■□□□□ 0.76
PCDH1-201ENST00000287008 RFX5P48382 616 aaPredicted RBP19.8■□□□□ 0.76
PCDH1-201ENST00000287008 TRIM72Q6ZMU5 477 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 BCAS4Q8TDM0 211 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 TRIM9Q9C026 710 aa19.8■□□□□ 0.76
PCDH1-201ENST00000287008 EXOC1LA0A1B0GW35 172 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 TXNDC9O14530 226 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 WDR72Q3MJ13 1102 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 SCYL3Q8IZE3 742 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 EPB41L4AQ9HCS5 686 aaPredicted RBP19.79■□□□□ 0.76
PCDH1-201ENST00000287008 HEY1Q9Y5J3 304 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 APOEP02649 317 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 DIP2AQ14689 1571 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 GNASQ5JWF2 1037 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 SHC4Q6S5L8 630 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 TMEM143Q96AN5 459 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 PGBD4Q96DM1 585 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 LBHD1Q9BQE6 289 aaPredicted RBP19.79■□□□□ 0.76
PCDH1-201ENST00000287008 GOLPH3LQ9H4A5 285 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.79■□□□□ 0.76
PCDH1-201ENST00000287008 CPS1P31327 1500 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 SYNGAP1Q96PV0 1343 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 KIF28PB7ZC32 967 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 STXBP3O00186 592 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 ADORA2BP29275 332 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 KCNB1Q14721 858 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 PHF20Q9BVI0 1012 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 AP1M1Q9BXS5 423 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 TMED2Q15363 201 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 DBN1Q16643 649 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 C9orf131Q5VYM1 1079 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 XRRA1Q6P2D8 792 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 SARM1Q6SZW1 724 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 TRIM62Q9BVG3 475 aa19.79■□□□□ 0.76
PCDH1-201ENST00000287008 TGFB2P61812 414 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 C2orf54Q08AI8 447 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 SMAP1Q8IYB5 467 aaPredicted RBP19.78■□□□□ 0.76
PCDH1-201ENST00000287008 PCSK1NQ9UHG2 260 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 PRR29P0C7W0 189 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 PDCD6IPQ8WUM4 868 aaKnown RBP19.78■□□□□ 0.76
PCDH1-201ENST00000287008 DIS3Q9Y2L1 958 aaKnown RBP19.78■□□□□ 0.76
PCDH1-201ENST00000287008 CHGBP05060 677 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 KRT7P08729 469 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 ADCY1Q08828 1119 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 FAF2Q96CS3 445 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 RIT2Q99578 217 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 SPON2Q9BUD6 331 aa19.78■□□□□ 0.76
PCDH1-201ENST00000287008 FARP1Q9Y4F1 1045 aaPredicted RBP19.78■□□□□ 0.76
PCDH1-201ENST00000287008 CASQ2O14958 399 aaPredicted RBP19.78■□□□□ 0.76
PCDH1-201ENST00000287008 ASAP2O43150 1006 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms