RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 SRFP11831 508 aa13.54□□□□□ -0.24
SPC25-201ENST00000282074 PHKA2P46019 1235 aa13.54□□□□□ -0.24
SPC25-201ENST00000282074 NOMO2Q5JPE7 1267 aa13.54□□□□□ -0.24
SPC25-201ENST00000282074 SPECC1Q5M775 1068 aa13.54□□□□□ -0.24
SPC25-201ENST00000282074 C1orf210Q8IVY1 113 aa13.54□□□□□ -0.24
SPC25-201ENST00000282074 SLC44A3Q8N4M1 653 aa13.54□□□□□ -0.24
SPC25-201ENST00000282074 LINC01465Q8N7H1 131 aa13.54□□□□□ -0.24
SPC25-201ENST00000282074 ZNF713Q8N859 430 aaPredicted RBP13.54□□□□□ -0.24
SPC25-201ENST00000282074 CMASQ8NFW8 434 aaPredicted RBP13.54□□□□□ -0.24
SPC25-201ENST00000282074 MAP4K1Q92918 833 aa13.54□□□□□ -0.24
SPC25-201ENST00000282074 ZNF668Q96K58 619 aaPredicted RBP13.54□□□□□ -0.24
SPC25-201ENST00000282074 GCOM2Q9BZD3 368 aaPredicted RBP13.54□□□□□ -0.24
SPC25-201ENST00000282074 NRDE2Q9H7Z3 1164 aa13.54□□□□□ -0.24
SPC25-201ENST00000282074 MRPL17Q9NRX2 175 aaKnown RBP13.54□□□□□ -0.24
SPC25-201ENST00000282074 CA14Q9ULX7 337 aa13.54□□□□□ -0.24
SPC25-201ENST00000282074 MYH9P35579 1960 aaKnown RBP13.53□□□□□ -0.24
SPC25-201ENST00000282074 DMXL1Q9Y485 3027 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 KRT37O76014 449 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 IGHDP01880 384 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 CNPP09543 421 aaKnown RBP13.53□□□□□ -0.24
SPC25-201ENST00000282074 SP9P0CG40 484 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 FGFR4P22455 802 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 CHMLP26374 656 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 SETQ01105 290 aaPredicted RBP13.53□□□□□ -0.24
SPC25-201ENST00000282074 RSPO4Q2I0M5 234 aaPredicted RBP13.53□□□□□ -0.24
SPC25-201ENST00000282074 TWF2Q6IBS0 349 aaKnown RBP13.53□□□□□ -0.24
SPC25-201ENST00000282074 RAB11FIP4Q86YS3 637 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 FEZF2Q8TBJ5 459 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 RSAD2Q8WXG1 361 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 CNTNAP3BQ96NU0 1288 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 RHOBTB2Q9BYZ6 727 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 CNTNAP3Q9BZ76 1288 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 INO80BQ9C086 356 aaPredicted RBP13.53□□□□□ -0.24
SPC25-201ENST00000282074 GBP3Q9H0R5 595 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 WDR6Q9NNW5 1121 aaKnown RBP13.53□□□□□ -0.24
SPC25-201ENST00000282074 TBC1D13Q9NVG8 400 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 RBM28Q9NW13 759 aaKnown RBP13.53□□□□□ -0.24
SPC25-201ENST00000282074 EPS15L1Q9UBC2 864 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 SSX2IPQ9Y2D8 614 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 INPP5FQ9Y2H2 1132 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 DNAH14Q0VDD8 3507 aa13.53□□□□□ -0.24
SPC25-201ENST00000282074 CCDC195A0A1B0GUA6 201 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 ATMINO43313 823 aaPredicted RBP13.52□□□□□ -0.25
SPC25-201ENST00000282074 KINO60870 393 aaKnown RBP13.52□□□□□ -0.25
SPC25-201ENST00000282074 OATP04181 439 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 ALDH2P05091 517 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 SSBP05455 408 aaKnown RBP eCLIP13.52□□□□□ -0.25
SPC25-201ENST00000282074 DCNP07585 359 aaKnown RBP13.52□□□□□ -0.25
SPC25-201ENST00000282074 CYP3A4P08684 503 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 SFPQP23246 707 aaKnown RBP eCLIP13.52□□□□□ -0.25
SPC25-201ENST00000282074 ANP32AP39687 249 aaKnown RBP13.52□□□□□ -0.25
SPC25-201ENST00000282074 SLC11A1P49279 550 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 CLK2P49760 499 aaKnown RBP13.52□□□□□ -0.25
SPC25-201ENST00000282074 RAB27AP51159 221 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 TYW1BQ6NUM6 668 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 MICU3Q86XE3 530 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 DCLK2Q8N568 766 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 GPR161Q8N6U8 529 aaKnown RBP13.52□□□□□ -0.25
SPC25-201ENST00000282074 URGCPQ8TCY9 931 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 BCL7CQ8WUZ0 217 aaPredicted RBP13.52□□□□□ -0.25
SPC25-201ENST00000282074 PGBD4Q96DM1 585 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 RBM8AQ9Y5S9 174 aaKnown RBP13.52□□□□□ -0.25
SPC25-201ENST00000282074 DENND4AQ7Z401 1863 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 SPTBN2O15020 2390 aa13.52□□□□□ -0.25
SPC25-201ENST00000282074 IGLV3-22A0A075B6J6 115 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 WDR64B1ANS9 1081 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 SGSM2O43147 1006 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 N4BP1O75113 896 aaKnown RBP13.51□□□□□ -0.25
SPC25-201ENST00000282074 ZNF623O75123 536 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 CSDE1O75534 798 aaKnown RBP13.51□□□□□ -0.25
SPC25-201ENST00000282074 OFD1O75665 1012 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 ADH1AP07327 375 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 DNM2P50570 870 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 LONRF3Q496Y0 759 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 TTC22Q5TAA0 569 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 GPR152Q8TDT2 470 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 LPPQ93052 612 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 SHDQ96IW2 340 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 FAM193BQ96PV7 902 aaPredicted RBP13.51□□□□□ -0.25
SPC25-201ENST00000282074 MAN1C1Q9NR34 630 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 ARHGEF3Q9NR81 526 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 BARHL2Q9NY43 387 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.51□□□□□ -0.25
SPC25-201ENST00000282074 DLGAP2Q9P1A6 1054 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 KANSL3Q9P2N6 904 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 DNAJB4Q9UDY4 337 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 FAN1Q9Y2M0 1017 aa13.51□□□□□ -0.25
SPC25-201ENST00000282074 V9GY48 417 aaPredicted RBP13.51□□□□□ -0.25
SPC25-201ENST00000282074 LILRB3O75022 631 aa13.5□□□□□ -0.25
SPC25-201ENST00000282074 GSPT1P15170 499 aaKnown RBP13.5□□□□□ -0.25
SPC25-201ENST00000282074 JAKMIP3Q5VZ66 844 aa13.5□□□□□ -0.25
SPC25-201ENST00000282074 DCLRE1AQ6PJP8 1040 aa13.5□□□□□ -0.25
SPC25-201ENST00000282074 SUMF1Q8NBK3 374 aa13.5□□□□□ -0.25
SPC25-201ENST00000282074 SECISBP2LQ93073 1101 aaKnown RBP13.5□□□□□ -0.25
SPC25-201ENST00000282074 MS4A3Q96HJ5 214 aa13.5□□□□□ -0.25
SPC25-201ENST00000282074 VN1R3Q9BXE9 311 aa13.5□□□□□ -0.25
SPC25-201ENST00000282074 FAM105AQ9NUU6 356 aa13.5□□□□□ -0.25
SPC25-201ENST00000282074 NCDNQ9UBB6 729 aa13.5□□□□□ -0.25
SPC25-201ENST00000282074 PIN4Q9Y237 131 aaKnown RBP13.5□□□□□ -0.25
SPC25-201ENST00000282074 GPR179Q6PRD1 2367 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms