RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PRKG2Q13237 762 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 PDCD2Q16342 344 aaPredicted RBP5.32□□□□□ -1.56
CD44-202ENST00000278385 FYB2Q5VWT5 728 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 FAM180BQ6P0A1 224 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 CHST15Q7LFX5 561 aaPredicted RBP5.32□□□□□ -1.56
CD44-202ENST00000278385 SAPCD2Q86UD0 394 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 SLC41A1Q8IVJ1 513 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 SIRT2Q8IXJ6 389 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 FAM43AQ8N2R8 423 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 CBARPQ8N350 705 aaPredicted RBP5.32□□□□□ -1.56
CD44-202ENST00000278385 NUP43Q8NFH3 380 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 CCT6BQ92526 530 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 CCDC47Q96A33 483 aaKnown RBP5.32□□□□□ -1.56
CD44-202ENST00000278385 GCC1Q96CN9 775 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 FUBP3Q96I24 572 aaKnown RBP eCLIP5.32□□□□□ -1.56
CD44-202ENST00000278385 HHIPL1Q96JK4 782 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 PTCHD1Q96NR3 888 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 FCRL3Q96P31 734 aaPredicted RBP5.32□□□□□ -1.56
CD44-202ENST00000278385 SIN3AQ96ST3 1273 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 TTC1Q99614 292 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 CDK19Q9BWU1 502 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 MTFR1LQ9H019 292 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 CXorf56Q9H5V9 222 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 ALG13Q9NP73 1137 aaKnown RBP5.32□□□□□ -1.56
CD44-202ENST00000278385 CRTAC1Q9NQ79 661 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 BLOC1S4Q9NUP1 217 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 C19orf73Q9NVV2 129 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 FNIP2Q9P278 1114 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 PTPN22Q9Y2R2 807 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 GPR52Q9Y2T5 361 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 GPR55Q9Y2T6 319 aaPredicted RBP5.32□□□□□ -1.56
CD44-202ENST00000278385 GIT1Q9Y2X7 761 aa5.32□□□□□ -1.56
CD44-202ENST00000278385 ARHGEF10O15013 1369 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 ADGRB1O14514 1584 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 NPHP3-ACAD11A0A0J9YXS1 232 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 K7ESF4 209 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 NEMP1O14524 444 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 ABLIM1O14639 778 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 AURKAO14965 403 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 FGF10O15520 208 aaPredicted RBP5.31□□□□□ -1.56
CD44-202ENST00000278385 ZEB2O60315 1214 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 MBD4O95243 580 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 CPP00450 1065 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 MPOP05164 745 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 GLULP15104 373 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 BPIP17213 487 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 CCND1P24385 295 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 ADD2P35612 726 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 FLT3P36888 993 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 PIK3CAP42336 1068 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 GRK6P43250 576 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 PFKPQ01813 784 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 TRIM14Q14142 442 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 SEPT7Q16181 437 aaKnown RBP5.31□□□□□ -1.56
CD44-202ENST00000278385 ABCB5Q2M3G0 1257 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 NBPF8Q3BBV2 869 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 FAM209AQ5JX71 171 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 KIAA1614Q5VZ46 1190 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 IQCEQ6IPM2 695 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 RCSD1Q6JBY9 416 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 ZPBP2Q6X784 338 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 SNX32Q86XE0 403 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 IRF2BP1Q8IU81 584 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 UNC5CLQ8IV45 518 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 FBXO15Q8NCQ5 510 aaPredicted RBP5.31□□□□□ -1.56
CD44-202ENST00000278385 LSM14AQ8ND56 463 aaKnown RBP5.31□□□□□ -1.56
CD44-202ENST00000278385 USP7Q93009 1102 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 LIN37Q96GY3 246 aaPredicted RBP5.31□□□□□ -1.56
CD44-202ENST00000278385 FAM84AQ96KN4 292 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 DIRC2Q96SL1 478 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 PPP1R16BQ96T49 567 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 AP1M1Q9BXS5 423 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 PDGFDQ9GZP0 370 aaPredicted RBP5.31□□□□□ -1.56
CD44-202ENST00000278385 RNF32Q9H0A6 362 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 SLC12A5Q9H2X9 1139 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 NSUN3Q9H649 340 aaKnown RBP5.31□□□□□ -1.56
CD44-202ENST00000278385 IFT22Q9H7X7 185 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 TBC1D22BQ9NU19 505 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 ERVK13-1Q9NX77 482 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 PDP2Q9P2J9 529 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 DBR1Q9UK59 544 aaKnown RBP5.31□□□□□ -1.56
CD44-202ENST00000278385 GJD2Q9UKL4 321 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 TPCN1Q9ULQ1 816 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 YBX2Q9Y2T7 364 aaKnown RBP5.31□□□□□ -1.56
CD44-202ENST00000278385 TMX2Q9Y320 296 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 EMC9Q9Y3B6 208 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 CDK12Q9NYV4 1490 aaPredicted RBP5.31□□□□□ -1.56
CD44-202ENST00000278385 NALCNQ8IZF0 1738 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 SHPRHQ149N8 1683 aa5.31□□□□□ -1.56
CD44-202ENST00000278385 NHSL1Q5SYE7 1610 aa5.3□□□□□ -1.56
CD44-202ENST00000278385 CENPJQ9HC77 1338 aaPredicted RBP5.3□□□□□ -1.56
CD44-202ENST00000278385 SYNRGQ9UMZ2 1314 aa5.3□□□□□ -1.56
CD44-202ENST00000278385 GTPBP10A4D1E9 387 aaKnown RBP5.3□□□□□ -1.56
CD44-202ENST00000278385 FADS2P1A8MWK0 482 aa5.3□□□□□ -1.56
CD44-202ENST00000278385 FZD9O00144 591 aa5.3□□□□□ -1.56
CD44-202ENST00000278385 MYO1BO43795 1136 aa5.3□□□□□ -1.56
CD44-202ENST00000278385 NPHS1O60500 1241 aa5.3□□□□□ -1.56
CD44-202ENST00000278385 PSPNO60542 156 aa5.3□□□□□ -1.56
CD44-202ENST00000278385 LTFP02788 710 aa5.3□□□□□ -1.56
CD44-202ENST00000278385 SNRPB2P08579 225 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms