RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 NFXL1Q6ZNB6 911 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 SLC43A3Q8NBI5 491 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 MAF1Q9H063 256 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 ZC3H7BQ9UGR2 993 aaKnown RBP11.35□□□□□ -0.59
LRTM1-201ENST00000273286 CCPG1Q9ULG6 757 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 VCANP13611 3396 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 B4DLN1 442 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 CTAGE5O15320 804 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 SUPT20HL2P0C7V6 817 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 TOP1P11387 765 aaKnown RBP11.35□□□□□ -0.59
LRTM1-201ENST00000273286 CSF2RAP15509 400 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 MRPL12P52815 198 aaKnown RBP11.35□□□□□ -0.59
LRTM1-201ENST00000273286 ITGA7Q13683 1181 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 RAB30Q15771 203 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 TMEM240Q5SV17 173 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 BTNL9Q6UXG8 535 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 KCTD1Q719H9 257 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 STK35Q8TDR2 534 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 MORC4Q8TE76 937 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 FBXL18Q96ME1 805 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 HIPK3Q9H422 1215 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 IL23AQ9NPF7 189 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 IL17RBQ9NRM6 502 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 TCP11L1Q9NUJ3 509 aa11.35□□□□□ -0.59
LRTM1-201ENST00000273286 TTC28Q96AY4 2481 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 RAD50Q92878 1312 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 SALL3Q9BXA9 1300 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 PFKMP08237 780 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 CPT1AP50416 773 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 MFAP1P55081 439 aaKnown RBP11.34□□□□□ -0.59
LRTM1-201ENST00000273286 CCDC96Q2M329 555 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 BRDTQ58F21 947 aaPredicted RBP11.34□□□□□ -0.59
LRTM1-201ENST00000273286 OGFOD3Q6PK18 319 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 CXCL17Q6UXB2 119 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 NSMFQ6X4W1 530 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 TP53INP2Q8IXH6 220 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 RPUSD2Q8IZ73 545 aaKnown RBP11.34□□□□□ -0.59
LRTM1-201ENST00000273286 TTC14Q96N46 770 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 RANBP17Q9H2T7 1088 aaKnown RBP11.34□□□□□ -0.59
LRTM1-201ENST00000273286 TOMM22Q9NS69 142 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 MSRAQ9UJ68 235 aa11.34□□□□□ -0.59
LRTM1-201ENST00000273286 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.33□□□□□ -0.6
LRTM1-201ENST00000273286 NKRFO15226 690 aaKnown RBP eCLIP11.33□□□□□ -0.6
LRTM1-201ENST00000273286 FOXP2O15409 715 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 FGBP02675 491 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 MAPK8P45983 427 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 BEX3Q00994 111 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 CDK5R2Q13319 367 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 DUSP28Q4G0W2 176 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 MCMDC2Q4G0Z9 681 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 TAPT1Q6NXT6 567 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 ZNF365Q70YC5 407 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 SMYD4Q8IYR2 804 aaPredicted RBP11.33□□□□□ -0.6
LRTM1-201ENST00000273286 FLCNQ8NFG4 579 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 DNERQ8NFT8 737 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 HERVK_113Q902F9 699 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 RNF41Q9H4P4 317 aaPredicted RBP11.33□□□□□ -0.6
LRTM1-201ENST00000273286 DISC1Q9NRI5 854 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 EYSQ5T1H1 3165 aa11.33□□□□□ -0.6
LRTM1-201ENST00000273286 ASTN1O14525 1302 aa11.32□□□□□ -0.6
LRTM1-201ENST00000273286 WDR19Q8NEZ3 1342 aa11.32□□□□□ -0.6
LRTM1-201ENST00000273286 NMT2O60551 498 aa11.32□□□□□ -0.6
LRTM1-201ENST00000273286 KPNA6O60684 536 aa11.32□□□□□ -0.6
LRTM1-201ENST00000273286 HDAC1Q13547 482 aaPredicted RBP11.32□□□□□ -0.6
LRTM1-201ENST00000273286 TTLL4Q14679 1199 aa11.32□□□□□ -0.6
LRTM1-201ENST00000273286 CCDC178Q5BJE1 867 aa11.32□□□□□ -0.6
LRTM1-201ENST00000273286 MUM1L1Q5H9M0 696 aa11.32□□□□□ -0.6
LRTM1-201ENST00000273286 AKNAD1Q5T1N1 836 aa11.32□□□□□ -0.6
LRTM1-201ENST00000273286 GPATCH4Q5T3I0 446 aaKnown RBP11.32□□□□□ -0.6
LRTM1-201ENST00000273286 ANKRD45Q5TZF3 282 aa11.32□□□□□ -0.6
LRTM1-201ENST00000273286 SYDE2Q5VT97 1194 aa11.32□□□□□ -0.6
LRTM1-201ENST00000273286 C16orf59Q7L2K0 433 aa11.32□□□□□ -0.6
LRTM1-201ENST00000273286 FBXO16Q8IX29 292 aaPredicted RBP11.32□□□□□ -0.6
LRTM1-201ENST00000273286 OTUD7AQ8TE49 926 aaPredicted RBP11.32□□□□□ -0.6
LRTM1-201ENST00000273286 LRRC37A2A6NM11 1700 aa11.32□□□□□ -0.6
LRTM1-201ENST00000273286 RBM47A0AV96 593 aaKnown RBP11.31□□□□□ -0.6
LRTM1-201ENST00000273286 RNGTTO60942 597 aaKnown RBP11.31□□□□□ -0.6
LRTM1-201ENST00000273286 FGAP02671 866 aa11.31□□□□□ -0.6
LRTM1-201ENST00000273286 CYP2C18P33260 490 aa11.31□□□□□ -0.6
LRTM1-201ENST00000273286 ALDH5A1P51649 535 aaPredicted RBP11.31□□□□□ -0.6
LRTM1-201ENST00000273286 PDE1AP54750 535 aa11.31□□□□□ -0.6
LRTM1-201ENST00000273286 CYP27C1Q4G0S4 372 aa11.31□□□□□ -0.6
LRTM1-201ENST00000273286 EEPD1Q7L9B9 569 aa11.31□□□□□ -0.6
LRTM1-201ENST00000273286 C3orf58Q8NDZ4 430 aa11.31□□□□□ -0.6
LRTM1-201ENST00000273286 TMEM47Q9BQJ4 181 aa11.31□□□□□ -0.6
LRTM1-201ENST00000273286 NOC4LQ9BVI4 516 aaKnown RBP11.31□□□□□ -0.6
LRTM1-201ENST00000273286 SLC28A3Q9HAS3 691 aa11.31□□□□□ -0.6
LRTM1-201ENST00000273286 PRUNE2Q8WUY3 3088 aa11.31□□□□□ -0.6
LRTM1-201ENST00000273286 PTPDC1A2A3K4 754 aa11.3□□□□□ -0.6
LRTM1-201ENST00000273286 B4GALT4O60513 344 aa11.3□□□□□ -0.6
LRTM1-201ENST00000273286 FAM87AP0C7U9 286 aa11.3□□□□□ -0.6
LRTM1-201ENST00000273286 HSPD1P10809 573 aaKnown RBP11.3□□□□□ -0.6
LRTM1-201ENST00000273286 PDHBP11177 359 aa11.3□□□□□ -0.6
LRTM1-201ENST00000273286 NME2P22392 152 aa11.3□□□□□ -0.6
LRTM1-201ENST00000273286 ARNTP27540 789 aa11.3□□□□□ -0.6
LRTM1-201ENST00000273286 RRP1P56182 461 aaKnown RBP11.3□□□□□ -0.6
LRTM1-201ENST00000273286 BAATQ14032 418 aaPredicted RBP11.3□□□□□ -0.6
LRTM1-201ENST00000273286 PPP2R5BQ15173 497 aa11.3□□□□□ -0.6
LRTM1-201ENST00000273286 VPS53Q5VIR6 699 aa11.3□□□□□ -0.6
LRTM1-201ENST00000273286 RNF207Q6ZRF8 634 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms