RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 SLC35F6Q8N357 371 aa16.69■□□□□ 0.26
SF3B4-201ENST00000271628 AFAP1L1Q8TED9 768 aa16.69■□□□□ 0.26
SF3B4-201ENST00000271628 IFIH1Q9BYX4 1025 aaKnown RBP16.69■□□□□ 0.26
SF3B4-201ENST00000271628 ARFGAP3Q9NP61 516 aa16.69■□□□□ 0.26
SF3B4-201ENST00000271628 HSPBP1Q9NZL4 362 aa16.69■□□□□ 0.26
SF3B4-201ENST00000271628 CDC23Q9UJX2 597 aa16.69■□□□□ 0.26
SF3B4-201ENST00000271628 PCDHA13Q9Y5I0 950 aa16.69■□□□□ 0.26
SF3B4-201ENST00000271628 GSTTP1A0A1W2PQM5 241 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 N4BP1O75113 896 aaKnown RBP16.68■□□□□ 0.26
SF3B4-201ENST00000271628 PGK2P07205 417 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 ACTN1P12814 892 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 ATP4AP20648 1035 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 CNGA1P29973 690 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 POLGP54098 1239 aaPredicted RBP16.68■□□□□ 0.26
SF3B4-201ENST00000271628 TEX35Q5T0J7 233 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 WDR78Q5VTH9 848 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 CC2D1AQ6P1N0 951 aaPredicted RBP16.68■□□□□ 0.26
SF3B4-201ENST00000271628 FMNL3Q8IVF7 1028 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 RDH13Q8NBN7 331 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 GPRC5AQ8NFJ5 357 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 NAPGQ99747 312 aaPredicted RBP16.68■□□□□ 0.26
SF3B4-201ENST00000271628 PCIF1Q9H4Z3 704 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 XPNPEP1Q9NQW7 623 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 PPME1Q9Y570 386 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 P4HA2O15460 535 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 TLR2O60603 784 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 GGPS1O95749 300 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 STAT5BP51692 787 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 CYP27A1Q02318 531 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 KLHL30Q0D2K2 578 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 ASIC2Q16515 512 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 MORC4Q8TE76 937 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 SLC7A3Q8WY07 619 aa16.68■□□□□ 0.26
SF3B4-201ENST00000271628 ASB14A6NK59 587 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 RBAK-RBAKDNI3L0D1 243 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 ZNF263O14978 683 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 POTEJP0CG39 1038 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 RFC5P40937 340 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 VAMP7P51809 220 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 BRDTQ58F21 947 aaPredicted RBP16.67■□□□□ 0.26
SF3B4-201ENST00000271628 TAF3Q5VWG9 929 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 EEPD1Q7L9B9 569 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 KCNN1Q92952 543 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 FGD4Q96M96 766 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 CBWD1Q9BRT8 395 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 PARD6BQ9BYG5 372 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 DHX33Q9H6R0 707 aaKnown RBP16.67■□□□□ 0.26
SF3B4-201ENST00000271628 AZI2Q9H6S1 392 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 LRRC37A2A6NM11 1700 aa16.67■□□□□ 0.26
SF3B4-201ENST00000271628 CCDC151A5D8V7 595 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 CYP2C8P10632 490 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 MAGEA1P43355 309 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 CHMP4BP1P59074 171 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 MCCD1P59942 119 aaPredicted RBP16.66■□□□□ 0.26
SF3B4-201ENST00000271628 APBA1Q02410 837 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 EMC2Q15006 297 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 BRD3Q15059 726 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 LY6KQ17RY6 165 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 ZNF526Q8TF50 670 aaPredicted RBP16.66■□□□□ 0.26
SF3B4-201ENST00000271628 MS4A4AQ96JQ5 239 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 R3HDMLQ9H3Y0 253 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 SIX2Q9NPC8 291 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 PDHXO00330 501 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 SOCS7O14512 581 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 RFX1P22670 979 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 ANXA13P27216 316 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 TCF7P36402 384 aaPredicted RBP16.66■□□□□ 0.26
SF3B4-201ENST00000271628 SLC18A3Q16572 532 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 EXOC8Q8IYI6 725 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 C2orf69Q8N8R5 385 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 BSNDQ8WZ55 320 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 FAM167AQ96KS9 214 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 LACRTQ9GZZ8 138 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 POLR3FQ9H1D9 316 aaPredicted RBP16.66■□□□□ 0.26
SF3B4-201ENST00000271628 GBA2Q9HCG7 927 aaPredicted RBP16.66■□□□□ 0.26
SF3B4-201ENST00000271628 TRIM10Q9UDY6 481 aa16.66■□□□□ 0.26
SF3B4-201ENST00000271628 ZNFX1Q9P2E3 1918 aaKnown RBP16.66■□□□□ 0.26
SF3B4-201ENST00000271628 PMM2O15305 246 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 PJA2O43164 708 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 TBC1D8O95759 1140 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 PRKCIP41743 596 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 GCLCP48506 637 aaPredicted RBP16.65■□□□□ 0.26
SF3B4-201ENST00000271628 MYL7Q01449 175 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 CELF3Q5SZQ8 465 aaKnown RBP16.65■□□□□ 0.26
SF3B4-201ENST00000271628 C10orf76Q5T2E6 689 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 IRF2BP2Q7Z5L9 587 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 ANKRD23Q86SG2 305 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 USP37Q86T82 979 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 SECISBP2LQ93073 1101 aaKnown RBP16.65■□□□□ 0.26
SF3B4-201ENST00000271628 UBXN6Q9BZV1 441 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 PORCNQ9H237 461 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 ARHGAP28Q9P2N2 729 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 CCL15-CCL14A0A0B4J2E2 113 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 RCCD1A6NED2 376 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 TISP43B9A030 160 aa16.65■□□□□ 0.26
SF3B4-201ENST00000271628 NOP56O00567 594 aaKnown RBP16.65■□□□□ 0.26
SF3B4-201ENST00000271628 STRNO43815 780 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms