RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 ME3Q16798 604 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 LONRF3Q496Y0 759 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 NCAPH2Q6IBW4 605 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 ANKRD54Q6NXT1 300 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 GLB1LQ6UWU2 654 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 OTUD6AQ7L8S5 288 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 MRPL43Q8N983 215 aaKnown RBP19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 SUSD6Q92537 303 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 TNFRSF25Q93038 417 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 TMEM143Q96AN5 459 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 PHF7Q9BWX1 381 aaPredicted RBP19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 ZSWIM4Q9H7M6 989 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 BRMS1Q9HCU9 246 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 FAM105AQ9NUU6 356 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 PLXNA4Q9HCM2 1894 aa19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 NT5C1B-RDH14C9J2C7 533 aa19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 SRGAP2CP0DJJ0 459 aa19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 TECP42680 631 aa19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 RAB27AP51159 221 aa19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 LAMTOR4Q0VGL1 99 aa19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 SMC1AQ14683 1233 aaKnown RBP19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 CBX2Q14781 532 aaPredicted RBP19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 LLGL2Q6P1M3 1020 aa19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 PSPC1Q8WXF1 523 aaKnown RBP19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 GTF3C6Q969F1 213 aa19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 DYDC2Q96IM9 177 aa19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 S1PR5Q9H228 398 aa19.56■□□□□ 0.72
CSNK1D-201ENST00000269361 C2orf71A6NGG8 1288 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 OFD1O75665 1012 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 LARGE1O95461 756 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 CYP4A11Q02928 519 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 CTTNQ14247 550 aaKnown RBP19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 XKR9Q5GH70 373 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 NOMO2Q5JPE7 1267 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 SRGAP1Q7Z6B7 1085 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 TPH2Q8IWU9 490 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 EDAQ92838 391 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 PGBD4Q96DM1 585 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 RPGRIP1Q96KN7 1286 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 AGPAT5Q9NUQ2 364 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 TBC1D13Q9NVG8 400 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 PCDHB2Q9Y5E7 798 aa19.55■□□□□ 0.72
CSNK1D-201ENST00000269361 MEIS3P2A8K0S8 358 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 ZBTB39O15060 712 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 ASAP2O43150 1006 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 GAS2O43903 313 aaKnown RBP19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 ZC3H11AO75152 810 aaKnown RBP eCLIP19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 SLITRK3O94933 977 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 CXCL14O95715 111 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 HOXB8P17481 243 aaPredicted RBP19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 BMS1Q14692 1282 aaKnown RBP19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 EMC2Q15006 297 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 ERICH6BQ5W0A0 696 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 SYCE2Q6PIF2 218 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 NSUN7Q8NE18 718 aaKnown RBP19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 TCP11Q8WWU5 503 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 TMEM169Q96HH4 297 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 MINDY3Q9H8M7 445 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 BMP2KQ9NSY1 1161 aaPredicted RBP19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 PCDHA12Q9UN75 941 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 INPP5FQ9Y2H2 1132 aa19.54■□□□□ 0.72
CSNK1D-201ENST00000269361 CARNS1A5YM72 827 aa19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 BTBD18B2RXH4 712 aa19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 HOXA11P31270 313 aaPredicted RBP19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 NEK4P51957 841 aa19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 RNASELQ05823 741 aaKnown RBP19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 HFE2Q6ZVN8 426 aa19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 MRPL10Q7Z7H8 261 aaKnown RBP19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 FERMT3Q86UX7 667 aa19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 TMEM173Q86WV6 379 aaPredicted RBP19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 VPS52Q8N1B4 723 aa19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 IGSF21Q96ID5 467 aa19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 HSD17B14Q9BPX1 270 aa19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 EIF2AK1Q9BQI3 630 aaKnown RBP19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 APOL5Q9BWW9 433 aa19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 NRDE2Q9H7Z3 1164 aa19.53■□□□□ 0.72
CSNK1D-201ENST00000269361 JAK2O60674 1132 aa19.52■□□□□ 0.72
CSNK1D-201ENST00000269361 EIF5BO60841 1220 aaKnown RBP19.52■□□□□ 0.72
CSNK1D-201ENST00000269361 CLASP2O75122 1294 aaKnown RBP19.52■□□□□ 0.72
CSNK1D-201ENST00000269361 GALTP07902 379 aa19.52■□□□□ 0.72
CSNK1D-201ENST00000269361 CALCRLQ16602 461 aa19.52■□□□□ 0.72
CSNK1D-201ENST00000269361 DDX53Q86TM3 631 aaKnown RBP19.52■□□□□ 0.72
CSNK1D-201ENST00000269361 RNF149Q8NC42 400 aa19.52■□□□□ 0.72
CSNK1D-201ENST00000269361 CASP10Q92851 521 aa19.52■□□□□ 0.72
CSNK1D-201ENST00000269361 HCFC2Q9Y5Z7 792 aa19.52■□□□□ 0.72
CSNK1D-201ENST00000269361 LYPLA2O95372 231 aa19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 CA8P35219 290 aa19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 TRIM29Q14134 588 aa19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 TPRNQ4KMQ1 711 aa19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 UBXN11Q5T124 520 aa19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 AGMOQ6ZNB7 445 aa19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 ZNF280BQ86YH2 543 aa19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 DIS3L2Q8IYB7 885 aaKnown RBP19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 URGCPQ8TCY9 931 aa19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 BCL7CQ8WUZ0 217 aaPredicted RBP19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 MFSD14AQ96MC6 490 aa19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 MTRQ99707 1265 aa19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 GBP3Q9H0R5 595 aa19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 ZBP1Q9H171 429 aa19.51■□□□□ 0.71
CSNK1D-201ENST00000269361 TTC12Q9H892 705 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms