RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 DHX33Q9H6R0 707 aaKnown RBP16.83■□□□□ 0.28
COPS3-201ENST00000268717 EXOC7Q9UPT5 735 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 MYH11P35749 1972 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 CEP290O15078 2479 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 GOLGA6L9A6NEM1 432 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 NKRFO15226 690 aaKnown RBP eCLIP16.82■□□□□ 0.28
COPS3-201ENST00000268717 MAPK13O15264 365 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 AKAP3O75969 853 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 PSMC2P35998 433 aaKnown RBP16.82■□□□□ 0.28
COPS3-201ENST00000268717 STAT5BP51692 787 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 LY6KQ17RY6 165 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 HAUS6Q7Z4H7 955 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 MAP4K3Q8IVH8 894 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 FBXO16Q8IX29 292 aaPredicted RBP16.82■□□□□ 0.28
COPS3-201ENST00000268717 EXOC8Q8IYI6 725 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 TRPV1Q8NER1 839 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 ZNF397Q8NF99 534 aaPredicted RBP16.82■□□□□ 0.28
COPS3-201ENST00000268717 BORCS6Q96GS4 357 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 GPR20Q99678 358 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 AZI2Q9H6S1 392 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 XPNPEP1Q9NQW7 623 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 OGDHLQ9ULD0 1010 aa16.82■□□□□ 0.28
COPS3-201ENST00000268717 TCF7P36402 384 aaPredicted RBP16.81■□□□□ 0.28
COPS3-201ENST00000268717 NPTX2P47972 431 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 PEX3P56589 373 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 TARBP2Q15633 366 aaKnown RBP16.81■□□□□ 0.28
COPS3-201ENST00000268717 MEA1Q16626 185 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 TSR1Q2NL82 804 aaKnown RBP16.81■□□□□ 0.28
COPS3-201ENST00000268717 LHX8Q68G74 356 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 CYP26C1Q6V0L0 522 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 MAEAQ7L5Y9 396 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 EEPD1Q7L9B9 569 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 SYCP3Q8IZU3 236 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 ANKLE1Q8NAG6 615 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 TMEM161BQ8NDZ6 487 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 CPLX3Q8WVH0 158 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 EMID1Q96A84 441 aaPredicted RBP16.81■□□□□ 0.28
COPS3-201ENST00000268717 CEP89Q96ST8 783 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 TINF2Q9BSI4 451 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 GPRC5CQ9NQ84 441 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 GTPBP10A4D1E9 387 aaKnown RBP16.81■□□□□ 0.28
COPS3-201ENST00000268717 NOP56O00567 594 aaKnown RBP16.81■□□□□ 0.28
COPS3-201ENST00000268717 GAS2O43903 313 aaKnown RBP16.81■□□□□ 0.28
COPS3-201ENST00000268717 HNRNPH3P31942 346 aaKnown RBP16.81■□□□□ 0.28
COPS3-201ENST00000268717 POLGP54098 1239 aaPredicted RBP16.81■□□□□ 0.28
COPS3-201ENST00000268717 MCCD1P59942 119 aaPredicted RBP16.81■□□□□ 0.28
COPS3-201ENST00000268717 CDK17Q00537 523 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 EMC2Q15006 297 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 PPP2R5AQ15172 486 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 NYAP1Q6ZVC0 841 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 DHX37Q8IY37 1157 aaKnown RBP16.81■□□□□ 0.28
COPS3-201ENST00000268717 FAM186BQ8IYM0 893 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 BBXQ8WY36 941 aaPredicted RBP16.81■□□□□ 0.28
COPS3-201ENST00000268717 IFT74Q96LB3 600 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 SH2D3AQ9BRG2 576 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 FRMD4BQ9Y2L6 1034 aa16.81■□□□□ 0.28
COPS3-201ENST00000268717 MYH9P35579 1960 aaKnown RBP16.8■□□□□ 0.28
COPS3-201ENST00000268717 RNF225M0QZC1 329 aaPredicted RBP16.8■□□□□ 0.28
COPS3-201ENST00000268717 CLIC2O15247 247 aa16.8■□□□□ 0.28
COPS3-201ENST00000268717 MSCO60682 206 aa16.8■□□□□ 0.28
COPS3-201ENST00000268717 AFPP02771 609 aaKnown RBP16.8■□□□□ 0.28
COPS3-201ENST00000268717 TXNP10599 105 aaKnown RBP16.8■□□□□ 0.28
COPS3-201ENST00000268717 CNGA1P29973 690 aa16.8■□□□□ 0.28
COPS3-201ENST00000268717 KCNH2Q12809 1159 aa16.8■□□□□ 0.28
COPS3-201ENST00000268717 LAMC2Q13753 1193 aa16.8■□□□□ 0.28
COPS3-201ENST00000268717 TAPT1Q6NXT6 567 aa16.8■□□□□ 0.28
COPS3-201ENST00000268717 SLC7A3Q8WY07 619 aa16.8■□□□□ 0.28
COPS3-201ENST00000268717 PPP1R13BQ96KQ4 1090 aa16.8■□□□□ 0.28
COPS3-201ENST00000268717 PCMTD1Q96MG8 357 aaPredicted RBP16.8■□□□□ 0.28
COPS3-201ENST00000268717 KATNBL1Q9H079 304 aa16.8■□□□□ 0.28
COPS3-201ENST00000268717 NUCKS1Q9H1E3 243 aaKnown RBP16.8■□□□□ 0.28
COPS3-201ENST00000268717 KMT5AQ9NQR1 393 aa16.8■□□□□ 0.28
COPS3-201ENST00000268717 DDX20Q9UHI6 824 aaKnown RBP16.8■□□□□ 0.28
COPS3-201ENST00000268717 ARID2Q68CP9 1835 aa16.8■□□□□ 0.28
COPS3-201ENST00000268717 ALPK3Q96L96 1907 aa16.79■□□□□ 0.28
COPS3-201ENST00000268717 MNX1P50219 401 aaPredicted RBP16.79■□□□□ 0.28
COPS3-201ENST00000268717 MTERF2Q49AM1 385 aa16.79■□□□□ 0.28
COPS3-201ENST00000268717 PRAMEF19Q5SWL8 479 aa16.79■□□□□ 0.28
COPS3-201ENST00000268717 TRMT1LQ7Z2T5 733 aaKnown RBP16.79■□□□□ 0.28
COPS3-201ENST00000268717 NEK11Q8NG66 645 aa16.79■□□□□ 0.28
COPS3-201ENST00000268717 SLC35C1Q96A29 364 aa16.79■□□□□ 0.28
COPS3-201ENST00000268717 SPATA33Q96N06 139 aa16.79■□□□□ 0.28
COPS3-201ENST00000268717 ZNHIT6Q9NWK9 470 aaKnown RBP16.79■□□□□ 0.28
COPS3-201ENST00000268717 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.79■□□□□ 0.28
COPS3-201ENST00000268717 ARHGAP28Q9P2N2 729 aa16.79■□□□□ 0.28
COPS3-201ENST00000268717 TBX20Q9UMR3 447 aa16.79■□□□□ 0.28
COPS3-201ENST00000268717 USP27XA6NNY8 438 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 SLC16A4O15374 487 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 SEPT4O43236 478 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 ARL2P36404 184 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 CASP4P49662 377 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 KCNMA1Q12791 1236 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 HSDL1Q3SXM5 330 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 DNTTIP2Q5QJE6 756 aaKnown RBP16.78■□□□□ 0.28
COPS3-201ENST00000268717 DIS3LQ8TF46 1054 aaKnown RBP16.78■□□□□ 0.28
COPS3-201ENST00000268717 ATP8B4Q8TF62 1192 aa16.78■□□□□ 0.28
COPS3-201ENST00000268717 PAWRQ96IZ0 340 aaKnown RBP16.78■□□□□ 0.28
COPS3-201ENST00000268717 JPH2Q9BR39 696 aaPredicted RBP16.78■□□□□ 0.28
COPS3-201ENST00000268717 POLR3FQ9H1D9 316 aaPredicted RBP16.78■□□□□ 0.28
COPS3-201ENST00000268717 SMARCAD1Q9H4L7 1026 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms