RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CCDC105Q8IYK2 499 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 ARFGAP2Q8N6H7 521 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 ANKRD42Q8N9B4 389 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 TRIM7Q9C029 511 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 EPB41L4BQ9H329 900 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 TBK1Q9UHD2 729 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 PYGMP11217 842 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 COMTP21964 271 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 GJC1P36383 396 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 PPP3CAQ08209 521 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 DGKZQ13574 1117 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 MIGA2Q7L4E1 593 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 PNMA8AQ86V59 439 aaPredicted RBP18.15■□□□□ 0.5
SQLE-201ENST00000265896 PPM1KQ8N3J5 372 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 TCP11Q8WWU5 503 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 ERP44Q9BS26 406 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 SWAP70Q9UH65 585 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 PRR12Q9ULL5 1215 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 ADAMTSL1Q8N6G6 1762 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 K7ENM7 598 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 PPP1R12BO60237 982 aaPredicted RBP18.15■□□□□ 0.5
SQLE-201ENST00000265896 FSBPO95073 299 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 DLATP10515 647 aaKnown RBP18.15■□□□□ 0.5
SQLE-201ENST00000265896 SOX10P56693 466 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 HP1BP3Q5SSJ5 553 aaPredicted RBP18.15■□□□□ 0.5
SQLE-201ENST00000265896 SLFN11Q7Z7L1 901 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 LRRC34Q8IZ02 419 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 DHX38Q92620 1227 aaKnown RBP18.15■□□□□ 0.5
SQLE-201ENST00000265896 EIF4E1BA6NMX2 242 aaKnown RBP18.14■□□□□ 0.49
SQLE-201ENST00000265896 CYP26A1O43174 497 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 EYA4O95677 639 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 BMP3P12645 472 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 SETQ01105 290 aaPredicted RBP18.14■□□□□ 0.49
SQLE-201ENST00000265896 DENND2CQ68D51 928 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 OTOP1Q7RTM1 612 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 ZKSCAN4Q969J2 545 aaPredicted RBP18.14■□□□□ 0.49
SQLE-201ENST00000265896 MRRFQ96E11 262 aaKnown RBP18.14■□□□□ 0.49
SQLE-201ENST00000265896 SAAL1Q96ER3 474 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 BORCS6Q96GS4 357 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 CDK5RAP2Q96SN8 1893 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 METTL14Q9HCE5 456 aaKnown RBP18.14■□□□□ 0.49
SQLE-201ENST00000265896 APEX2Q9UBZ4 518 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 BAIAP2L1Q9UHR4 511 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 CYP3A4P08684 503 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 SCTRP47872 440 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 POU5F1Q01860 360 aaKnown RBP18.14■□□□□ 0.49
SQLE-201ENST00000265896 MAP2K1Q02750 393 aaPredicted RBP18.14■□□□□ 0.49
SQLE-201ENST00000265896 PPP1R7Q15435 360 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 ANKRD20A8PQ5CZ79 823 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 GKAP1Q5VSY0 366 aaPredicted RBP18.14■□□□□ 0.49
SQLE-201ENST00000265896 C6orf89Q6UWU4 347 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 C1orf186Q6ZWK4 172 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 SLC47A2Q86VL8 602 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 SUGP1Q8IWZ8 645 aaKnown RBP18.14■□□□□ 0.49
SQLE-201ENST00000265896 ZC3H3Q8IXZ2 948 aaKnown RBP18.14■□□□□ 0.49
SQLE-201ENST00000265896 SYCE1Q8N0S2 351 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 PRELID2Q8N945 189 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 GDAP1Q8TB36 358 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 HVCN1Q96D96 273 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 PCDHB18PQ96TA0 734 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 STK33Q9BYT3 514 aa18.14■□□□□ 0.49
SQLE-201ENST00000265896 CCDC188H7C350 402 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 RGS16O15492 202 aaPredicted RBP18.13■□□□□ 0.49
SQLE-201ENST00000265896 HIP1RO75146 1068 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 CLTAP09496 248 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 SREBF1P36956 1147 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 HIBCHQ6NVY1 386 aaPredicted RBP18.13■□□□□ 0.49
SQLE-201ENST00000265896 ZNF720Q7Z2F6 126 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 XPO6Q96QU8 1125 aaKnown RBP18.13■□□□□ 0.49
SQLE-201ENST00000265896 TOPORSQ9NS56 1045 aaPredicted RBP18.13■□□□□ 0.49
SQLE-201ENST00000265896 CYP3A7-CYP3A51PA0A087WV96 503 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 SPOPO43791 374 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 CYP3A7P24462 503 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 CDC25CP30307 473 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 MAP2K2P36507 400 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 CCDC137Q6PK04 289 aaKnown RBP18.13■□□□□ 0.49
SQLE-201ENST00000265896 ZDHHC24Q6UX98 284 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 TBC1D1Q86TI0 1168 aaPredicted RBP18.13■□□□□ 0.49
SQLE-201ENST00000265896 RASGEF1CQ8N431 466 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 CRYGNQ8WXF5 182 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 CALR3Q96L12 384 aaKnown RBP18.13■□□□□ 0.49
SQLE-201ENST00000265896 LXNQ9BS40 222 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 COA1Q9GZY4 146 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 UNC45AQ9H3U1 944 aa18.13■□□□□ 0.49
SQLE-201ENST00000265896 COL5A3P25940 1745 aaPredicted RBP18.13■□□□□ 0.49
SQLE-201ENST00000265896 TRIM37O94972 964 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 SP4Q02446 784 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 C10orf76Q5T2E6 689 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 CYB5D1Q6P9G0 228 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 LRIG3Q6UXM1 1119 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 CSRNP1Q96S65 589 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 HSD17B14Q9BPX1 270 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 ZNF577Q9BSK1 485 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 GLIS2Q9BZE0 524 aaPredicted RBP18.12■□□□□ 0.49
SQLE-201ENST00000265896 ZDHHC18Q9NUE0 388 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 MAST2Q6P0Q8 1798 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 CENPFP49454 3210 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 GOLGA6L10A0A0M3HER8 536 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 DRD4P21917 467 aa18.12■□□□□ 0.49
SQLE-201ENST00000265896 PTENP60484 403 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms