RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 ABT1Q9ULW3 272 aaKnown RBP16.04■□□□□ 0.16
NID1-201ENST00000264187 ATP11BQ9Y2G3 1177 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 SYNGAP1Q96PV0 1343 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 GMNCA6NCL1 334 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 GPC5P78333 572 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 LRRC63Q05C16 580 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 SFR1Q86XK3 245 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 TEX9Q8N6V9 391 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 TMEM35BQ8NCS4 154 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 TRIM45Q9H8W5 580 aaPredicted RBP16.04■□□□□ 0.16
NID1-201ENST00000264187 HDAC6Q9UBN7 1215 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 SLC16A4O15374 487 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 CHRNA3P32297 505 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 KDSRQ06136 332 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 TBL3Q12788 808 aaKnown RBP16.04■□□□□ 0.16
NID1-201ENST00000264187 TFDP2Q14188 446 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 HEATR6Q6AI08 1181 aaKnown RBP16.04■□□□□ 0.16
NID1-201ENST00000264187 OSBP2Q969R2 916 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 SMAD5Q99717 465 aaKnown RBP16.04■□□□□ 0.16
NID1-201ENST00000264187 SP110Q9HB58 689 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 TMEM161AQ9NX61 479 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 RCOR1Q9UKL0 485 aa16.04■□□□□ 0.16
NID1-201ENST00000264187 CCDC78A2IDD5 438 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 PPP2R2AP63151 447 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 SUPT20HL1Q3ZLR7 823 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 SLFN12LQ6IEE8 588 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 PHF21AQ96BD5 680 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 ZCCHC17Q9NP64 241 aaKnown RBP16.03■□□□□ 0.16
NID1-201ENST00000264187 PIK3R2O00459 728 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 ORC4O43929 436 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 CACNB3P54284 484 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 C1orf54Q8WWF1 131 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 ZNF341Q9BYN7 854 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 UNC45AQ9H3U1 944 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 NUP160Q12769 1436 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 PRR23D1E9PI22 279 aaPredicted RBP16.03■□□□□ 0.16
NID1-201ENST00000264187 PRR23D2P0DMB1 279 aaPredicted RBP16.03■□□□□ 0.16
NID1-201ENST00000264187 TYK2P29597 1187 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 SYNDIG1Q9H7V2 258 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 SYTL2Q9HCH5 934 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 SENP1Q9P0U3 644 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 ASAP1Q9ULH1 1129 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 H0YC42 278 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 PER1O15534 1290 aaPredicted RBP16.03■□□□□ 0.16
NID1-201ENST00000264187 HUS1O60921 280 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 MYO1DO94832 1006 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 ZNF568Q3ZCX4 644 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 RABGAP1LQ5R372 815 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 ZNF564Q8TBZ8 553 aaPredicted RBP16.03■□□□□ 0.16
NID1-201ENST00000264187 PCDHGB4Q9UN71 923 aa16.03■□□□□ 0.16
NID1-201ENST00000264187 EDC4Q6P2E9 1401 aaKnown RBP16.03■□□□□ 0.16
NID1-201ENST00000264187 DFFAO00273 331 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 ATP5HO75947 161 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 C11orf74Q86VG3 221 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 ANKMY2Q8IV38 441 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 YIPF2Q9BWQ6 316 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 EHD2Q9NZN4 543 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 CLCA2Q9UQC9 943 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 PRPF3O43395 683 aaKnown RBP16.02■□□□□ 0.16
NID1-201ENST00000264187 GFAPP14136 432 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 STXBP2Q15833 593 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 NLRP14Q86W24 1093 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 STX19Q8N4C7 294 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 ZC3H15Q8WU90 426 aaKnown RBP16.02■□□□□ 0.16
NID1-201ENST00000264187 RMDN1Q96DB5 314 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 A2MP01023 1474 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 MEFVO15553 781 aaPredicted RBP16.02■□□□□ 0.16
NID1-201ENST00000264187 SDC4P31431 198 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 KRT72Q14CN4 511 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 ANGPT1Q15389 498 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 PARP9Q8IXQ6 854 aa16.02■□□□□ 0.16
NID1-201ENST00000264187 DHX35Q9H5Z1 703 aaKnown RBP16.02■□□□□ 0.16
NID1-201ENST00000264187 TERF2Q15554 542 aa16.02■□□□□ 0.15
NID1-201ENST00000264187 ADCK1Q86TW2 530 aa16.02■□□□□ 0.15
NID1-201ENST00000264187 COG1Q8WTW3 980 aa16.02■□□□□ 0.15
NID1-201ENST00000264187 LOC102724428A0A0B4J2F2 783 aa16.02■□□□□ 0.15
NID1-201ENST00000264187 ARHGAP10A1A4S6 786 aa16.02■□□□□ 0.15
NID1-201ENST00000264187 ENO1P06733 434 aaKnown RBP16.02■□□□□ 0.15
NID1-201ENST00000264187 SIK1P57059 783 aa16.02■□□□□ 0.15
NID1-201ENST00000264187 NCAPHQ15003 741 aa16.02■□□□□ 0.15
NID1-201ENST00000264187 AARS2Q5JTZ9 985 aaKnown RBP16.02■□□□□ 0.15
NID1-201ENST00000264187 ANKRD40Q6AI12 368 aa16.02■□□□□ 0.15
NID1-201ENST00000264187 MRPL40Q9NQ50 206 aaKnown RBP16.02■□□□□ 0.15
NID1-201ENST00000264187 ABHD10Q9NUJ1 306 aa16.02■□□□□ 0.15
NID1-201ENST00000264187 ARIH2O95376 493 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 KRT8P05787 483 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 ICE2Q659A1 982 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 MAGEB5Q9BZ81 275 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 PNMA6FA0A0J9YX94 578 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 PRAMEF22A3QJZ6 481 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 MYO1GB0I1T2 1018 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 NNMTP40261 264 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 LEMD3Q9Y2U8 911 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 ZMYM4Q5VZL5 1548 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 SPDYE5A6NIY4 337 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 NR3C1P04150 777 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 TSPY1Q01534 308 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 SPDYE7PQ495Y7 208 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 ARHGEF25Q86VW2 580 aa16.01■□□□□ 0.15
NID1-201ENST00000264187 TTC13Q8NBP0 860 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms