RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 IDEP14735 1019 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 NAMPTP43490 491 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 MBTD1Q05BQ5 628 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 DMP1Q13316 513 aaPredicted RBP20.25■□□□□ 0.83
SDF4-201ENST00000263741 RNPC3Q96LT9 517 aaKnown RBP20.25■□□□□ 0.83
SDF4-201ENST00000263741 ODF2LQ9ULJ1 636 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 TTC3P53804 2025 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 SLC16A4O15374 487 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 ZNF202O95125 648 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 EDN1P05305 212 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 SLFN14P0C7P3 912 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 PLS3P13797 630 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.25■□□□□ 0.833e-10■■□□□ 11.5
SDF4-201ENST00000263741 CATSPER4Q7RTX7 472 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 FMR1NBQ8N0W7 255 aaPredicted RBP20.25■□□□□ 0.83
SDF4-201ENST00000263741 USP38Q8NB14 1042 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 TIPINQ9BVW5 301 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 TRIM9Q9C026 710 aa20.25■□□□□ 0.83
SDF4-201ENST00000263741 B4GALT5O43286 388 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 NR1I2O75469 434 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 PRR29P0C7W0 189 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 DEFB103AP81534 67 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 CDC42EP1Q00587 391 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 CUL4BQ13620 913 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 PPP2R5AQ15172 486 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 ODR4Q5SWX8 454 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 CDCA2Q69YH5 1023 aaPredicted RBP20.24■□□□□ 0.83
SDF4-201ENST00000263741 CLEC17AQ6ZS10 378 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 SFR1Q86XK3 245 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 MYCT1Q8N699 235 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 PAGE5Q96GU1 130 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 KMT5AQ9NQR1 393 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 TBC1D7Q9P0N9 293 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 SQORQ9Y6N5 450 aa20.24■□□□□ 0.83
SDF4-201ENST00000263741 TTLL13PA6NNM8 815 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 SFPQP23246 707 aaKnown RBP eCLIP20.23■□□□□ 0.832e-6■■■□□ 17.6
SDF4-201ENST00000263741 ASIC1P78348 528 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 SNW1Q13573 536 aaKnown RBP20.23■□□□□ 0.83
SDF4-201ENST00000263741 ENGASEQ8NFI3 743 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 HPS3Q969F9 1004 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 PARVGQ9HBI0 331 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 GOLGA6L22H0YM25 854 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 GPR182O15218 404 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 ACTN1P12814 892 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 BMP8BP34820 402 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 MRE11P49959 708 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 ZNF131P52739 623 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 WDR5P61964 334 aaKnown RBP20.23■□□□□ 0.83
SDF4-201ENST00000263741 FAM160A1Q05DH4 1040 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 IKBKEQ14164 716 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 FAM109BQ6ICB4 259 aaPredicted RBP20.23■□□□□ 0.83
SDF4-201ENST00000263741 KRBA2Q6ZNG9 492 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 SRGAP1Q7Z6B7 1085 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 RTN4RL1Q86UN2 441 aaPredicted RBP20.23■□□□□ 0.83
SDF4-201ENST00000263741 CDR2LQ86X02 465 aaPredicted RBP20.23■□□□□ 0.83
SDF4-201ENST00000263741 ZBTB8OSQ8IWT0 167 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 TDHQ8IZJ6 230 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 ZNF710Q8N1W2 664 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 CNNM3Q8NE01 707 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 HERVK_113Q902F9 699 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 CPB2Q96IY4 423 aa20.23■□□□□ 0.83
SDF4-201ENST00000263741 PYM1Q9BRP8 204 aaKnown RBP20.23■□□□□ 0.83
SDF4-201ENST00000263741 GZF1Q9H116 711 aaPredicted RBP20.23■□□□□ 0.83
SDF4-201ENST00000263741 PIN4Q9Y237 131 aaKnown RBP20.23■□□□□ 0.83
SDF4-201ENST00000263741 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.22■□□□□ 0.83
SDF4-201ENST00000263741 IFNLR1Q8IU57 520 aaPredicted RBP20.22■□□□□ 0.83
SDF4-201ENST00000263741 FGFBP2Q9BYJ0 223 aa20.22■□□□□ 0.83
SDF4-201ENST00000263741 CCDC113Q9H0I3 377 aa20.22■□□□□ 0.83
SDF4-201ENST00000263741 MAGEF1Q9HAY2 307 aa20.22■□□□□ 0.83
SDF4-201ENST00000263741 TSPAN1O60635 241 aa20.22■□□□□ 0.83
SDF4-201ENST00000263741 ERLIN2O94905 339 aa20.22■□□□□ 0.83
SDF4-201ENST00000263741 NMT1P30419 496 aaKnown RBP20.22■□□□□ 0.83
SDF4-201ENST00000263741 AMHR2Q16671 573 aa20.22■□□□□ 0.83
SDF4-201ENST00000263741 TAS1R3Q7RTX0 852 aa20.22■□□□□ 0.83
SDF4-201ENST00000263741 APBB2Q92870 758 aa20.22■□□□□ 0.83
SDF4-201ENST00000263741 ADAM2Q99965 735 aa20.22■□□□□ 0.83
SDF4-201ENST00000263741 GRXCR1A8MXD5 290 aa20.21■□□□□ 0.83
SDF4-201ENST00000263741 K7ENM7 598 aa20.21■□□□□ 0.83
SDF4-201ENST00000263741 UBE2HP62256 183 aa20.21■□□□□ 0.83
SDF4-201ENST00000263741 FAM117BQ6P1L5 589 aa20.21■□□□□ 0.83
SDF4-201ENST00000263741 FIZ1Q96SL8 496 aa20.21■□□□□ 0.83
SDF4-201ENST00000263741 NFKBIZQ9BYH8 718 aa20.21■□□□□ 0.83
SDF4-201ENST00000263741 AGPAT5Q9NUQ2 364 aa20.21■□□□□ 0.83
SDF4-201ENST00000263741 PANK4Q9NVE7 773 aa20.21■□□□□ 0.83
SDF4-201ENST00000263741 LARSQ9P2J5 1176 aaKnown RBP20.21■□□□□ 0.83
SDF4-201ENST00000263741 ARHGAP28Q9P2N2 729 aa20.21■□□□□ 0.83
SDF4-201ENST00000263741 DENND3A2RUS2 1198 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 PRKCBP05771 671 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 POU5F1BQ06416 359 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 COASYQ13057 564 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 FAM178BQ8IXR5 827 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 MYOCDQ8IZQ8 938 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 TMEM161BQ8NDZ6 487 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 ERCC4Q92889 916 aaPredicted RBP20.2■□□□□ 0.82
SDF4-201ENST00000263741 C7orf25Q9BPX7 421 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 C2orf40Q9H1Z8 148 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 C17orf75Q9HAS0 396 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 USP25Q9UHP3 1055 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 PHLPP2Q6ZVD8 1323 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 ABHD14A-ACY1A0A1B0GW23 586 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms