RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 CD19P15391 556 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 RINT1Q6NUQ1 792 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 DCUN1D2Q6PH85 259 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 TMEM179Q6ZVK1 233 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 ARHGEF26Q96DR7 871 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 NUP85Q9BW27 656 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 GUCY2CP25092 1073 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 RPA1P27694 616 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 ATG4AQ8WYN0 398 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 ODF2LQ9ULJ1 636 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 PRR12Q9ULL5 1215 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 DCDC2CA8MYV0 355 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 GOLGA8SH3BPF8 625 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 GOLGA8MH3BSY2 632 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 ECEL1O95672 775 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 GAS8O95995 478 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 C10orf76Q5T2E6 689 aa17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 CNOT8Q9UFF9 292 aaKnown RBP17.42■□□□□ 0.38
PDZRN3-201ENST00000263666 NPEPPSP55786 919 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 SESN3P58005 492 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 KAT5Q92993 513 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 SEC16BQ96JE7 1060 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 POP1Q99575 1024 aaKnown RBP17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 HOMER3Q9NSC5 361 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 KLC4Q9NSK0 619 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 PRLRP16471 622 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 AP3B2Q13367 1082 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 TMEM119Q4V9L6 283 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 KIF2BQ8N4N8 673 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 EPS8L3Q8TE67 593 aaKnown RBP17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 RAPGEF5Q92565 580 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 N4BP2L2Q92802 583 aaPredicted RBP17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 RNF25Q96BH1 459 aaPredicted RBP17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 MRPL11Q9Y3B7 192 aaKnown RBP17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 EYA4O95677 639 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 ATF2P15336 505 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 DPEP1P16444 411 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 COMTP21964 271 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 EDRF1Q3B7T1 1238 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 SYCP2LQ5T4T6 812 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 PLA2G4FQ68DD2 849 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 JAMLQ86YT9 394 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 SPIRE2Q8WWL2 714 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 NT5C1BQ96P26 610 aa17.41■□□□□ 0.38
PDZRN3-201ENST00000263666 CD58P19256 250 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 ZNF131P52739 623 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 CERS5Q8N5B7 392 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 C9orf72Q96LT7 481 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 FAM20AQ96MK3 541 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 AGTPBP1Q9UPW5 1226 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 VAMP7P51809 220 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 ZNF564Q8TBZ8 553 aaPredicted RBP17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 SLC35C1Q96A29 364 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 CBWD1Q9BRT8 395 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 NR2E1Q9Y466 385 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 NWD2Q9ULI1 1742 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 LRRIQ4A6NIV6 560 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 PI4K2BG5E9Z4 385 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 FECHP22830 423 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 MARCKSL1P49006 195 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 PRELPP51888 382 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 KIAA1755Q5JYT7 1200 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 SYT2Q8N9I0 419 aaPredicted RBP17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 KCNV2Q8TDN2 545 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 FBF1Q8TES7 1133 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 KLHL29Q96CT2 875 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 MYCBPQ99417 103 aaPredicted RBP17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 AGPAT1Q99943 283 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 RAVER2Q9HCJ3 691 aaKnown RBP17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 APEX2Q9UBZ4 518 aa17.4■□□□□ 0.38
PDZRN3-201ENST00000263666 POLRMTO00411 1230 aaKnown RBP17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 ARP10275 920 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 PEX19P40855 299 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 ZNF844Q08AG5 666 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 CCDC6Q16204 474 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 CBWD6Q4V339 395 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 ARSHQ5FYA8 562 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 CBWD3Q5JTY5 395 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 CBWD5Q5RIA9 395 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 ZNF449Q6P9G9 518 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 MICAL1Q8TDZ2 1067 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 C11orf70Q9BRQ4 267 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 IMPG2Q9BZV3 1241 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 NEUROG2Q9H2A3 272 aa17.39■□□□□ 0.38
PDZRN3-201ENST00000263666 MYH6P13533 1939 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 SOX10P56693 466 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 GPC5P78333 572 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 NID2Q14112 1375 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 SULF1Q8IWU6 871 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 RBM46Q8TBY0 533 aaKnown RBP17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 CEP170P1Q96L14 293 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 SEMA4AQ9H3S1 761 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 IKBKGQ9Y6K9 419 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 FAM107AO95990 144 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 KDM7AQ6ZMT4 941 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 CYFIP1Q7L576 1253 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 USP37Q86T82 979 aa17.39■□□□□ 0.37
PDZRN3-201ENST00000263666 KRT35Q92764 455 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms