RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 TCHPQ9BT92 498 aa13.85□□□□□ -0.19
CLNS1A-201ENST00000263309 DLL1O00548 723 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 TRAK2O60296 914 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 KINO60870 393 aaKnown RBP13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 SMC2O95347 1197 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 SLFN14P0C7P3 912 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 LIG1P18858 919 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 PTMSP20962 102 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 PEX3P56589 373 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 GRIN1Q05586 938 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 RAD51AP2Q09MP3 1159 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 PRPF4BQ13523 1007 aaKnown RBP13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 SHHQ15465 462 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 ECM1Q16610 540 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 HERC4Q5GLZ8 1057 aaPredicted RBP13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 MYOCDQ8IZQ8 938 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 LINC01465Q8N7H1 131 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 SPIRE2Q8WWL2 714 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 ZBTB10Q96DT7 871 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 BICD1Q96G01 975 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 LRCH3Q96II8 777 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 CTAGE1Q96RT6 745 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 ADAMTS10Q9H324 1103 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 PIN4Q9Y237 131 aaKnown RBP13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 NOC2LQ9Y3T9 749 aaKnown RBP13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 INSL6Q9Y581 213 aa13.84□□□□□ -0.19
CLNS1A-201ENST00000263309 KAT6AQ92794 2004 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 A0A1B0GVL5 298 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 N4BP3O15049 544 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 TLL1O43897 1013 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 NR1I2O75469 434 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 EOMESO95936 686 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 MAPTP10636 758 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 GLRA2P23416 452 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 SHC4Q6S5L8 630 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 DYMQ7RTS9 669 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 KSR1Q8IVT5 923 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 DDX12PQ92771 950 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 WNT8BQ93098 351 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 CEP89Q96ST8 783 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 ADAM2Q99965 735 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 NTPCRQ9BSD7 190 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 MRPL4Q9BYD3 311 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 TMEM134Q9H6X4 195 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 MRPL44Q9H9J2 332 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 RGS18Q9NS28 235 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 PANK4Q9NVE7 773 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 RMND1Q9NWS8 449 aa13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 MYH9P35579 1960 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-201ENST00000263309 DOCK5Q9H7D0 1870 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 ENPP3O14638 875 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 UPP2O95045 317 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 PFKFB1P16118 471 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 IBSPP21815 317 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 SARSP49591 514 aaKnown RBP13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 UBE2HP62256 183 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 ASIC1P78348 528 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 PSMD2Q13200 908 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 KYAT1Q16773 422 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 AXDND1Q5T1B0 1012 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 SYCP3Q8IZU3 236 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 YME1L1Q96TA2 773 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 ELAC1Q9H777 363 aaKnown RBP13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 TMEM206Q9H813 350 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 SLC28A3Q9HAS3 691 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 ERVK-5Q9HDB9 667 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 XPNPEP1Q9NQW7 623 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 AAASQ9NRG9 546 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 RWDD3Q9Y3V2 267 aa13.82□□□□□ -0.2
CLNS1A-201ENST00000263309 PVALEFA0A1B0GWK0 134 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 ACKR2O00590 384 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 ZNF202O95125 648 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 PRKCBP05771 671 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 AFMP43652 599 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 NPTX2P47972 431 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 YARSP54577 528 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 SMAD3P84022 425 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 CAPSQ13938 189 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 GIT2Q14161 759 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 BMS1Q14692 1282 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 LRIT3Q3SXY7 679 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 SPOUT1Q5T280 376 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 SLFN12LQ6IEE8 588 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 SLC27A1Q6PCB7 646 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 USP49Q70CQ1 688 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 NPAS4Q8IUM7 802 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 URGCPQ8TCY9 931 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 HVCN1Q96D96 273 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 ZNF668Q96K58 619 aaPredicted RBP13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 FAM193BQ96PV7 902 aaPredicted RBP13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 RAD9AQ99638 391 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 REEP2Q9BRK0 252 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 RUSC1Q9BVN2 902 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 CDHR5Q9HBB8 845 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 IFT122Q9HBG6 1241 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 GDPD2Q9HCC8 539 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 GPRC5CQ9NQ84 441 aa13.81□□□□□ -0.2
CLNS1A-201ENST00000263309 EXOC1Q9NV70 894 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms