RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 HAUS4Q9H6D7 363 aa15.83■□□□□ 0.12
CCDC6-201ENST00000263102 SMYD3Q9H7B4 428 aa15.83■□□□□ 0.12
CCDC6-201ENST00000263102 COPEO14579 308 aa15.83■□□□□ 0.12
CCDC6-201ENST00000263102 PRAMEF18Q5VWM3 479 aa15.83■□□□□ 0.12
CCDC6-201ENST00000263102 ACAD11Q709F0 780 aa15.83■□□□□ 0.12
CCDC6-201ENST00000263102 DHTKD1Q96HY7 919 aaPredicted RBP15.83■□□□□ 0.12
CCDC6-201ENST00000263102 TRIM4Q9C037 500 aa15.83■□□□□ 0.12
CCDC6-201ENST00000263102 C2orf40Q9H1Z8 148 aa15.83■□□□□ 0.12
CCDC6-201ENST00000263102 SLC25A13Q9UJS0 675 aa15.83■□□□□ 0.12
CCDC6-201ENST00000263102 STAT3P40763 770 aa15.83■□□□□ 0.12
CCDC6-201ENST00000263102 HEATR6Q6AI08 1181 aaKnown RBP15.83■□□□□ 0.12
CCDC6-201ENST00000263102 CRLF3Q8IUI8 442 aa15.83■□□□□ 0.12
CCDC6-201ENST00000263102 PGBD4Q96DM1 585 aa15.83■□□□□ 0.12
CCDC6-201ENST00000263102 MRPL4Q9BYD3 311 aaKnown RBP15.83■□□□□ 0.12
CCDC6-201ENST00000263102 DMAP1Q9NPF5 467 aaPredicted RBP15.83■□□□□ 0.12
CCDC6-201ENST00000263102 SCUBE2Q9NQ36 999 aa15.83■□□□□ 0.12
CCDC6-201ENST00000263102 CCDC78A2IDD5 438 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 DHX9Q08211 1270 aaKnown RBP15.82■□□□□ 0.12
CCDC6-201ENST00000263102 ALCAMQ13740 583 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 CCDC197Q8NCU1 140 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 SAAL1Q96ER3 474 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 CPVLQ9H3G5 476 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 HIST1H2AGP0C0S8 130 aaPredicted RBP15.82■□□□□ 0.12
CCDC6-201ENST00000263102 HIST1H2ADP20671 130 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 ATN1P54259 1190 aaPredicted RBP15.82■□□□□ 0.12
CCDC6-201ENST00000263102 DPYDQ12882 1025 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 FASTKD1Q53R41 847 aaKnown RBP15.82■□□□□ 0.12
CCDC6-201ENST00000263102 HIST1H2AHQ96KK5 128 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 HIST1H2AJQ99878 128 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 C11orf70Q9BRQ4 267 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 H2AFJQ9BTM1 129 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 TRIM55Q9BYV6 548 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 ING2Q9H160 280 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 STN1Q9H668 368 aaKnown RBP15.82■□□□□ 0.12
CCDC6-201ENST00000263102 MEFVO15553 781 aaPredicted RBP15.82■□□□□ 0.12
CCDC6-201ENST00000263102 CCDC159P0C7I6 412 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 IGFBP4P22692 258 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 MAPK9P45984 424 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 NR5A1Q13285 461 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 GRAMD1BQ3KR37 738 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 ZNF658Q5TYW1 1059 aaPredicted RBP15.82■□□□□ 0.12
CCDC6-201ENST00000263102 IRAK1BP1Q5VVH5 260 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 TTC7AQ9ULT0 858 aaPredicted RBP15.82■□□□□ 0.12
CCDC6-201ENST00000263102 ARAP3Q8WWN8 1544 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 RPRD2Q5VT52 1461 aaKnown RBP15.82■□□□□ 0.12
CCDC6-201ENST00000263102 GUCA1CO95843 209 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 GCKP35557 465 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 DR1Q01658 176 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 C16orf72Q14CZ0 275 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 SIX5Q8N196 739 aa15.82■□□□□ 0.12
CCDC6-201ENST00000263102 MARCH10Q8NA82 808 aaPredicted RBP15.82■□□□□ 0.12
CCDC6-201ENST00000263102 AARSP49588 968 aaKnown RBP eCLIP15.81■□□□□ 0.12
CCDC6-201ENST00000263102 HDLBPQ00341 1268 aaKnown RBP15.81■□□□□ 0.12
CCDC6-201ENST00000263102 SPTLC3Q9NUV7 552 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 SCAF8Q9UPN6 1271 aaKnown RBP15.81■□□□□ 0.12
CCDC6-201ENST00000263102 A0A0G2JND7 137 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 USP17L15C9J2P7 530 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 USP17L13C9JLJ4 530 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 USP17L11C9JVI0 530 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 USP17L18D6R9N7 530 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 USP17L22D6RA61 530 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 USP17L17D6RBQ6 530 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 USP17L19D6RCP7 530 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 USP17L20D6RJB6 530 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 ADD2P35612 726 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 USP17L24Q0WX57 530 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 SYCP2LQ5T4T6 812 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 USP17L6PQ6QN14 398 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 RPSAP08865 295 aaKnown RBP15.81■□□□□ 0.12
CCDC6-201ENST00000263102 SOAT1P35610 550 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 PEX19P40855 299 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 ALDH1A3P47895 512 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 SREBF2Q12772 1141 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 SNAPC2Q13487 334 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 HSP90AA5PQ58FG0 334 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 MCPH1Q8NEM0 835 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 OR9Q1Q8NGQ5 310 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 ERLEC1Q96DZ1 483 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 ABCA10Q8WWZ4 1543 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 RPS6KA5O75582 802 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 RWDD2BP57060 319 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 CDK17Q00537 523 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 FKBP3Q00688 224 aaKnown RBP15.81■□□□□ 0.12
CCDC6-201ENST00000263102 SNX17Q15036 470 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 TMEM35BQ8NCS4 154 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 RNF25Q96BH1 459 aaPredicted RBP15.81■□□□□ 0.12
CCDC6-201ENST00000263102 KLHL29Q96CT2 875 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 RNF26Q9BY78 433 aaPredicted RBP15.81■□□□□ 0.12
CCDC6-201ENST00000263102 ESRRAP11474 423 aaPredicted RBP15.81■□□□□ 0.12
CCDC6-201ENST00000263102 CSE1LP55060 971 aaKnown RBP15.81■□□□□ 0.12
CCDC6-201ENST00000263102 PLEKHM3Q6ZWE6 761 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 NLRP10Q86W26 655 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 RNF168Q8IYW5 571 aaPredicted RBP15.81■□□□□ 0.12
CCDC6-201ENST00000263102 SLC35F6Q8N357 371 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 STKLD1Q8NE28 680 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 ZNF560Q96MR9 790 aa15.81■□□□□ 0.12
CCDC6-201ENST00000263102 PUS7LQ9H0K6 701 aaKnown RBP15.81■□□□□ 0.12
CCDC6-201ENST00000263102 CNOT8Q9UFF9 292 aaKnown RBP15.81■□□□□ 0.12
CCDC6-201ENST00000263102 EIF4A3P38919 411 aaKnown RBP15.8■□□□□ 0.12
CCDC6-201ENST00000263102 RBM6P78332 1123 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms