RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 LY6KQ17RY6 165 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 DPY19L2Q6NUT2 758 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 XRRA1Q6P2D8 792 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 ABHD15Q6UXT9 468 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 TMEM161BQ8NDZ6 487 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 ATP6V0A1Q93050 837 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 PARD6BQ9BYG5 372 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 INTS2Q9H0H0 1204 aaKnown RBP14.78□□□□□ -0.04
VMP1-201ENST00000262291 GOLPH3Q9H4A6 298 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 XPNPEP1Q9NQW7 623 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 ANKEF1Q9NU02 776 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 ARGLU1Q9NWB6 273 aaPredicted RBP14.78□□□□□ -0.04
VMP1-201ENST00000262291 CLEC11AQ9Y240 323 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 A0A0G2JLL6 359 aaPredicted RBP14.78□□□□□ -0.04
VMP1-201ENST00000262291 CNMDO75829 334 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 ADSSP30520 456 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 GPS2Q13227 327 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 DMP1Q13316 513 aaPredicted RBP14.78□□□□□ -0.04
VMP1-201ENST00000262291 TRAPPC11Q7Z392 1133 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 PRRT2Q7Z6L0 340 aaPredicted RBP14.78□□□□□ -0.04
VMP1-201ENST00000262291 ERO1BQ86YB8 467 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 ANKRD13AQ8IZ07 590 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 CHST13Q8NET6 341 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 PLCB1Q9NQ66 1216 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 TOPORSQ9NS56 1045 aaPredicted RBP14.78□□□□□ -0.04
VMP1-201ENST00000262291 AIPL1Q9NZN9 384 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 DNAJC12Q9UKB3 198 aa14.78□□□□□ -0.04
VMP1-201ENST00000262291 UBE4BO95155 1302 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 SSU72P8A0A1W2PR75 194 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 SUPT20HL2P0C7V6 817 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 CYP2C8P10632 490 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 UBA1P22314 1058 aaKnown RBP14.77□□□□□ -0.04
VMP1-201ENST00000262291 KLRC1P26715 233 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 MARK3P27448 753 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 GJA5P36382 358 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 NFRKBQ6P4R8 1299 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 EP400NLQ6ZTU2 488 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 RIOX2Q8IUF8 465 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 POLR3FQ9H1D9 316 aaPredicted RBP14.77□□□□□ -0.04
VMP1-201ENST00000262291 CYP26B1Q9NR63 512 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 TBX20Q9UMR3 447 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 PACSIN2Q9UNF0 486 aaPredicted RBP14.77□□□□□ -0.04
VMP1-201ENST00000262291 SAR1BQ9Y6B6 198 aa14.77□□□□□ -0.04
VMP1-201ENST00000262291 WDR81Q562E7 1941 aa14.77□□□□□ -0.05
VMP1-201ENST00000262291 PDE2AO00408 941 aaPredicted RBP14.77□□□□□ -0.05
VMP1-201ENST00000262291 EIF3JO75822 258 aaKnown RBP14.77□□□□□ -0.05
VMP1-201ENST00000262291 LCA5LO95447 670 aa14.77□□□□□ -0.05
VMP1-201ENST00000262291 TBC1D8O95759 1140 aa14.77□□□□□ -0.05
VMP1-201ENST00000262291 KRT13P13646 458 aa14.77□□□□□ -0.05
VMP1-201ENST00000262291 NF2P35240 595 aa14.77□□□□□ -0.05
VMP1-201ENST00000262291 GTF2BQ00403 316 aa14.77□□□□□ -0.05
VMP1-201ENST00000262291 DRAP1Q14919 205 aaPredicted RBP14.77□□□□□ -0.05
VMP1-201ENST00000262291 GPR162Q16538 588 aa14.77□□□□□ -0.05
VMP1-201ENST00000262291 KIAA0753Q2KHM9 967 aa14.77□□□□□ -0.05
VMP1-201ENST00000262291 OTUD6AQ7L8S5 288 aa14.77□□□□□ -0.05
VMP1-201ENST00000262291 COG1Q8WTW3 980 aa14.77□□□□□ -0.05
VMP1-201ENST00000262291 KAT5Q92993 513 aa14.77□□□□□ -0.05
VMP1-201ENST00000262291 YY1AP1Q9H869 796 aa14.77□□□□□ -0.05
VMP1-201ENST00000262291 FTCDO95954 541 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
VMP1-201ENST00000262291 VAMP7P51809 220 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 NCKAP1LP55160 1127 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 PPATQ06203 517 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 SLC18A3Q16572 532 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 C1orf220Q5T0J3 134 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 MAP1SQ66K74 1059 aaPredicted RBP14.76□□□□□ -0.05
VMP1-201ENST00000262291 PHLDB3Q6NSJ2 640 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 MIS18BP1Q6P0N0 1132 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 FOXR1Q6PIV2 292 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 TRIM50Q86XT4 487 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 XXYLT1Q8NBI6 393 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 CAGE1Q8TC20 777 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 ZNF668Q96K58 619 aaPredicted RBP14.76□□□□□ -0.05
VMP1-201ENST00000262291 PNKPQ96T60 521 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 TMEM206Q9H813 350 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 RBPJLQ9UBG7 517 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 PAPPA2Q9BXP8 1791 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 CTAGE15A4D2H0 777 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 TACC1O75410 805 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 CTAGE8P0CG41 777 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 SLC39A4Q6P5W5 647 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 CTAGE6Q86UF2 777 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 PACS2Q86VP3 889 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 ARHGEF19Q8IW93 802 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 CTAGE4Q8IX94 777 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 CEP112Q8N8E3 955 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 SYN2Q92777 582 aaPredicted RBP14.76□□□□□ -0.05
VMP1-201ENST00000262291 BICD1Q96G01 975 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 SENP7Q9BQF6 1050 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 TSGA10Q9BZW7 698 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 NUCKS1Q9H1E3 243 aaKnown RBP14.76□□□□□ -0.05
VMP1-201ENST00000262291 ZNF302Q9NR11 478 aa14.76□□□□□ -0.05
VMP1-201ENST00000262291 SEPT11Q9NVA2 429 aaKnown RBP14.76□□□□□ -0.05
VMP1-201ENST00000262291 MYPNQ86TC9 1320 aa14.75□□□□□ -0.05
VMP1-201ENST00000262291 SYNGAP1Q96PV0 1343 aa14.75□□□□□ -0.05
VMP1-201ENST00000262291 SPDYE5A6NIY4 337 aa14.75□□□□□ -0.05
VMP1-201ENST00000262291 MAFGO15525 162 aa14.75□□□□□ -0.05
VMP1-201ENST00000262291 ARIH2O95376 493 aa14.75□□□□□ -0.05
VMP1-201ENST00000262291 CNGA1P29973 690 aa14.75□□□□□ -0.05
VMP1-201ENST00000262291 SMTNP53814 917 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms