RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 SEL1LQ9UBV2 794 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 SRPRBQ9Y5M8 271 aaKnown RBP15.2■□□□□ 0.02
CUX2-201ENST00000261726 KRT4P19013 534 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 ALCAMQ13740 583 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.2■□□□□ 0.02
CUX2-201ENST00000261726 PPRC1Q5VV67 1664 aaKnown RBP15.2■□□□□ 0.02
CUX2-201ENST00000261726 SEC24DO94855 1032 aaPredicted RBP15.2■□□□□ 0.02
CUX2-201ENST00000261726 ADORA2BP29275 332 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 GCLMP48507 274 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 PCYT1AP49585 367 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 NEK2P51955 445 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 RC3H1Q5TC82 1133 aaKnown RBP15.2■□□□□ 0.02
CUX2-201ENST00000261726 FAM161BQ96MY7 647 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 YIPF3Q9GZM5 350 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 ZCWPW1Q9H0M4 648 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 ZSWIM5Q9P217 1185 aa15.2■□□□□ 0.02
CUX2-201ENST00000261726 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
CUX2-201ENST00000261726 MYO1DO94832 1006 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 KCNA2P16389 499 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 SKIV2LQ15477 1246 aaKnown RBP15.19■□□□□ 0.02
CUX2-201ENST00000261726 KDELC2Q7Z4H8 507 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 GAS2L3Q86XJ1 694 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 MARCH10Q8NA82 808 aaPredicted RBP15.19■□□□□ 0.02
CUX2-201ENST00000261726 URGCPQ8TCY9 931 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 MAGEB5Q9BZ81 275 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 RUBCNLQ9H714 662 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 POLD4Q9HCU8 107 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 ZSCAN32Q9NX65 697 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 FAM135BQ49AJ0 1406 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 LRRC63Q05C16 580 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 CACNB2Q08289 660 aaPredicted RBP15.19■□□□□ 0.02
CUX2-201ENST00000261726 KRT39Q6A163 491 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 HPS4Q9NQG7 708 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 DFFAO00273 331 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 PRPF3O43395 683 aaKnown RBP15.19■□□□□ 0.02
CUX2-201ENST00000261726 SERPIND1P05546 499 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 MTMR1Q13613 665 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 FAM160B2Q86V87 743 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 PANX2Q96RD6 677 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 DHX36Q9H2U1 1008 aaKnown RBP15.19■□□□□ 0.02
CUX2-201ENST00000261726 DONSONQ9NYP3 566 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 ERVK-7P63135 1459 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 KIDINS220Q9ULH0 1771 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 CDK8P49336 464 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 GFPT1Q06210 699 aaPredicted RBP15.19■□□□□ 0.02
CUX2-201ENST00000261726 DMTNQ08495 405 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 ARL8AQ96BM9 186 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 SPON2Q9BUD6 331 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 CLTCQ00610 1675 aaKnown RBP15.19■□□□□ 0.02
CUX2-201ENST00000261726 SERPINI2O75830 405 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 ZRANB2O95218 330 aaKnown RBP eCLIP15.19■□□□□ 0.02
CUX2-201ENST00000261726 CARSP49589 748 aaKnown RBP15.19■□□□□ 0.02
CUX2-201ENST00000261726 ZNF211Q13398 564 aaPredicted RBP15.19■□□□□ 0.02
CUX2-201ENST00000261726 ZNF513Q8N8E2 541 aaPredicted RBP15.19■□□□□ 0.02
CUX2-201ENST00000261726 QTRT2Q9H974 415 aaKnown RBP15.19■□□□□ 0.02
CUX2-201ENST00000261726 SYTL2Q9HCH5 934 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 SENP1Q9P0U3 644 aa15.19■□□□□ 0.02
CUX2-201ENST00000261726 ABCB11O95342 1321 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 WBP4O75554 376 aaKnown RBP15.18■□□□□ 0.02
CUX2-201ENST00000261726 PLEKHA8P1O95397 391 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 PRAMEP78395 509 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 STXBP2Q15833 593 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 FASTKD1Q53R41 847 aaKnown RBP15.18■□□□□ 0.02
CUX2-201ENST00000261726 C11orf70Q9BRQ4 267 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 ABCA6Q8N139 1617 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 TOGARAM2Q6ZUX3 1019 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 ARHGEF25Q86VW2 580 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 FAM167BQ9BTA0 163 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 HAUS5O94927 633 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 VCAM1P19320 739 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 KLHL38Q2WGJ6 581 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 NUP85Q9BW27 656 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 FARP1Q9Y4F1 1045 aaPredicted RBP15.18■□□□□ 0.02
CUX2-201ENST00000261726 SYNGAP1Q96PV0 1343 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 FAM180AQ6UWF9 173 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 RHPN2Q8IUC4 686 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 SIK2Q9H0K1 926 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 ZBTB1Q9Y2K1 713 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 SLC16A4O15374 487 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 ARIH2O95376 493 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 MAGOHP61326 146 aaKnown RBP15.18■□□□□ 0.02
CUX2-201ENST00000261726 AP2B1P63010 937 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 HIF1AQ16665 826 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 TEDDM1Q5T9Z0 273 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 HEATR6Q6AI08 1181 aaKnown RBP15.18■□□□□ 0.02
CUX2-201ENST00000261726 OR6P1Q8NGX9 317 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 RAVER2Q9HCJ3 691 aaKnown RBP15.18■□□□□ 0.02
CUX2-201ENST00000261726 PALMDQ9NP74 551 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 DDX28Q9NUL7 540 aaKnown RBP15.18■□□□□ 0.02
CUX2-201ENST00000261726 SYNMO15061 1565 aa15.18■□□□□ 0.02
CUX2-201ENST00000261726 BLMP54132 1417 aaPredicted RBP15.18■□□□□ 0.02
CUX2-201ENST00000261726 GNAT1P11488 350 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 SKOR1P84550 965 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 DMC1Q14565 340 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 TMEM35BQ8NCS4 154 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 BEST2Q8NFU1 509 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 CYP26B1Q9NR63 512 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 AIPL1Q9NZN9 384 aa15.17■□□□□ 0.02
CUX2-201ENST00000261726 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms