RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 ARHGAP1Q07960 439 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 IRF5Q13568 498 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 STIM1Q13586 685 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 ZNF658Q5TYW1 1059 aaPredicted RBP20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 RINT1Q6NUQ1 792 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 MLKLQ8NB16 471 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 MAGEC3Q8TD91 643 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 ZNF302Q9NR11 478 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 EXOC1Q9NV70 894 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 KRT18P05783 430 aaKnown RBP20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 FLT3LGP49771 235 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 MYL5Q02045 173 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 TRMT1LQ7Z2T5 733 aaKnown RBP20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 SMYD4Q8IYR2 804 aaPredicted RBP20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 ETAA1Q9NY74 926 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 MAFBQ9Y5Q3 323 aaPredicted RBP20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 KAT6AQ92794 2004 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 ARHGEF35A5YM69 484 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 TMEM150BA6NC51 233 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 GOLGA6CA6NDK9 693 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 GH1P01241 217 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 GOLGA6DP0CG33 693 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 ATP1A3P13637 1013 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 RARRES1P49788 294 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 PRKCEQ02156 737 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 CACNB1Q02641 598 aaPredicted RBP20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 PRKCZQ05513 592 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 PRAMEF19Q5SWL8 479 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 TATDN2Q93075 761 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 REEP2Q9BRK0 252 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 GOLGA6AQ9NYA3 693 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 SMPD1P17405 629 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 GIT2Q14161 759 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 DUSP28Q4G0W2 176 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 CEP85LQ5SZL2 805 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 IQSEC1Q6DN90 963 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 C1orf186Q6ZWK4 172 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 ANO5Q75V66 913 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 COG1Q8WTW3 980 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 PCYT2Q99447 389 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 DACH1Q9UI36 760 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 GDAQ9Y2T3 454 aa20.6■□□□□ 0.89
COL4A3BP-201ENST00000261415 TTC36A6NLP5 189 aa20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 GPR25O00155 361 aa20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 STBD1O95210 358 aa20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 ZNF865P0CJ78 1059 aaPredicted RBP20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 EZRP15311 586 aaKnown RBP20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 LAMC2Q13753 1193 aa20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 PLA2G4FQ68DD2 849 aa20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 ZNF483Q8TF39 744 aaPredicted RBP20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 EMID1Q96A84 441 aaPredicted RBP20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 CRACR2AQ9BSW2 395 aa20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 HSD3B7Q9H2F3 369 aa20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 ANKEF1Q9NU02 776 aa20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 PANK4Q9NVE7 773 aa20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 KCND2Q9NZV8 630 aa20.59■□□□□ 0.89
COL4A3BP-201ENST00000261415 ADCY6O43306 1168 aa20.58■□□□□ 0.89
COL4A3BP-201ENST00000261415 CDR1P51861 262 aa20.58■□□□□ 0.89
COL4A3BP-201ENST00000261415 CLNS1AP54105 237 aaKnown RBP20.58■□□□□ 0.89
COL4A3BP-201ENST00000261415 SLC8A3P57103 927 aa20.58■□□□□ 0.89
COL4A3BP-201ENST00000261415 EHHADHQ08426 723 aa20.58■□□□□ 0.89
COL4A3BP-201ENST00000261415 CD99L2Q8TCZ2 262 aa20.58■□□□□ 0.89
COL4A3BP-201ENST00000261415 CCDC43Q96MW1 224 aaKnown RBP20.58■□□□□ 0.89
COL4A3BP-201ENST00000261415 SH2D3AQ9BRG2 576 aa20.58■□□□□ 0.89
COL4A3BP-201ENST00000261415 SAGE1Q9NXZ1 904 aa20.58■□□□□ 0.89
COL4A3BP-201ENST00000261415 CEP350Q5VT06 3117 aa20.58■□□□□ 0.89
COL4A3BP-201ENST00000261415 FRMD3A2A2Y4 597 aa20.58■□□□□ 0.88
COL4A3BP-201ENST00000261415 CD44P16070 742 aaKnown RBP20.58■□□□□ 0.88
COL4A3BP-201ENST00000261415 ATP4AP20648 1035 aa20.58■□□□□ 0.88
COL4A3BP-201ENST00000261415 HTTP42858 3142 aa20.58■□□□□ 0.88
COL4A3BP-201ENST00000261415 COASYQ13057 564 aa20.58■□□□□ 0.88
COL4A3BP-201ENST00000261415 FAM160B1Q5W0V3 765 aa20.58■□□□□ 0.88
COL4A3BP-201ENST00000261415 PADI6Q6TGC4 694 aa20.58■□□□□ 0.88
COL4A3BP-201ENST00000261415 CCDC65Q8IXS2 484 aa20.58■□□□□ 0.88
COL4A3BP-201ENST00000261415 TRIB2Q92519 343 aa20.58■□□□□ 0.88
COL4A3BP-201ENST00000261415 EMSYQ7Z589 1322 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 NKRFO15226 690 aaKnown RBP eCLIP20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 STAT5BP51692 787 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 TNFAIP2Q03169 654 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 XKR9Q5GH70 373 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 OTUD6AQ7L8S5 288 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 HPS3Q969F9 1004 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 SEPT9Q9UHD8 586 aaPredicted RBP20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 PPP1R3GB7ZBB8 358 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 LGR5O75473 907 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 HSPA6P17066 643 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 NPEPPSP55786 919 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 RWDD2BP57060 319 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 STK4Q13043 487 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 XKR3Q5GH77 459 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 TC2NQ8N9U0 490 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 PPTC7Q8NI37 304 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 AZI2Q9H6S1 392 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 EVPLQ92817 2033 aa20.57■□□□□ 0.88
COL4A3BP-201ENST00000261415 RSPH10B2B2RC85 870 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 OATP04181 439 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 RSPH10BP0C881 870 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 GOLGA8FQ08AF8 430 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 GOLGA8DPQ0D2H9 430 aa20.56■□□□□ 0.88
COL4A3BP-201ENST00000261415 TRIM50Q86XT4 487 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms