RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 SLITRK3O94933 977 aa21.25■□□□□ 0.99
TM6SF1-201ENST00000258909 KRT17Q04695 432 aa21.25■□□□□ 0.99
TM6SF1-201ENST00000258909 PDE12Q6L8Q7 609 aaKnown RBP21.25■□□□□ 0.99
TM6SF1-201ENST00000258909 LLGL2Q6P1M3 1020 aa21.25■□□□□ 0.99
TM6SF1-201ENST00000258909 TMC7Q7Z402 723 aa21.25■□□□□ 0.99
TM6SF1-201ENST00000258909 SLC39A11Q8N1S5 342 aa21.25■□□□□ 0.99
TM6SF1-201ENST00000258909 PSPC1Q8WXF1 523 aaKnown RBP21.25■□□□□ 0.99
TM6SF1-201ENST00000258909 ZSWIM4Q9H7M6 989 aa21.25■□□□□ 0.99
TM6SF1-201ENST00000258909 MINDY3Q9H8M7 445 aa21.25■□□□□ 0.99
TM6SF1-201ENST00000258909 FAM105AQ9NUU6 356 aa21.25■□□□□ 0.99
TM6SF1-201ENST00000258909 INPP5FQ9Y2H2 1132 aa21.25■□□□□ 0.99
TM6SF1-201ENST00000258909 USP15Q9Y4E8 981 aaPredicted RBP21.25■□□□□ 0.99
TM6SF1-201ENST00000258909 PPM1AP35813 382 aa21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 RFC5P40937 340 aa21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 BCAR1P56945 870 aa21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 LAMTOR4Q0VGL1 99 aa21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 TRIM29Q14134 588 aa21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 EMC2Q15006 297 aa21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 CALCRLQ16602 461 aa21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 OTUD6AQ7L8S5 288 aa21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 POP1Q99575 1024 aaKnown RBP21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 EIF2AK1Q9BQI3 630 aaKnown RBP21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 TRAIPQ9BWF2 469 aa21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 MRPL9Q9BYD2 267 aaKnown RBP21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 PCDHA12Q9UN75 941 aa21.24■□□□□ 0.99
TM6SF1-201ENST00000258909 ZC3H11AO75152 810 aaKnown RBP eCLIP21.23■□□□□ 0.99
TM6SF1-201ENST00000258909 TXKP42681 527 aa21.23■□□□□ 0.99
TM6SF1-201ENST00000258909 GUCY1B3Q02153 619 aa21.23■□□□□ 0.99
TM6SF1-201ENST00000258909 APOL5Q9BWW9 433 aa21.23■□□□□ 0.99
TM6SF1-201ENST00000258909 AGPAT5Q9NUQ2 364 aa21.23■□□□□ 0.99
TM6SF1-201ENST00000258909 MUTYHQ9UIF7 546 aa21.23■□□□□ 0.99
TM6SF1-201ENST00000258909 A0A087WWV3 80 aa21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 ATP2B1P20020 1258 aa21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 CA8P35219 290 aa21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 ALDH7A1P49419 539 aaKnown RBP21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 TMEM173Q86WV6 379 aaPredicted RBP21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 RNF135Q8IUD6 432 aa21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 EXOC8Q8IYI6 725 aa21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 RNF149Q8NC42 400 aa21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 CDCA3Q99618 268 aaPredicted RBP21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 TTC12Q9H892 705 aaPredicted RBP21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 NGRNQ9NPE2 291 aaKnown RBP21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 PPME1Q9Y570 386 aa21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 PCDHB2Q9Y5E7 798 aa21.22■□□□□ 0.99
TM6SF1-201ENST00000258909 NEMFO60524 1076 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 SKIP12755 728 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 TECP42680 631 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 GLB1LQ6UWU2 654 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 SRGAP1Q7Z6B7 1085 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 FERMT3Q86UX7 667 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 TCP11Q8WWU5 503 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 MTRQ99707 1265 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 HSD17B14Q9BPX1 270 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 GBP3Q9H0R5 595 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 XPNPEP1Q9NQW7 623 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 TBC1D13Q9NVG8 400 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 HCN4Q9Y3Q4 1203 aa21.21■□□□□ 0.99
TM6SF1-201ENST00000258909 PRR33A8MZF0 331 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 ZNF623O75123 536 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 OFD1O75665 1012 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 HOXA11P31270 313 aaPredicted RBP21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 RAB27AP51159 221 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 KCNC3Q14003 757 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 NOMO2Q5JPE7 1267 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 CCDC83Q8IWF9 413 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 NRDE2Q9H7Z3 1164 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 AFF1P51825 1210 aaKnown RBP21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 RNASELQ05823 741 aaKnown RBP21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 UBXN11Q5T124 520 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 ANKRD54Q6NXT1 300 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 AGMOQ6ZNB7 445 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 MRPL43Q8N983 215 aaKnown RBP21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 BCL7CQ8WUZ0 217 aaPredicted RBP21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 AUTS2Q8WXX7 1259 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 TMEM169Q96HH4 297 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 RPGRIP1Q96KN7 1286 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 MTMR9Q96QG7 549 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 TMEM60Q9H2L4 133 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 DNAJB4Q9UDY4 337 aa21.2■□□□□ 0.98
TM6SF1-201ENST00000258909 C2orf71A6NGG8 1288 aa21.19■□□□□ 0.98
TM6SF1-201ENST00000258909 POTEMA6NI47 508 aa21.19■□□□□ 0.98
TM6SF1-201ENST00000258909 ASAP2O43150 1006 aa21.19■□□□□ 0.98
TM6SF1-201ENST00000258909 B4GALT3O60512 393 aa21.19■□□□□ 0.98
TM6SF1-201ENST00000258909 EIF5BO60841 1220 aaKnown RBP21.19■□□□□ 0.98
TM6SF1-201ENST00000258909 MCM7P33993 719 aa21.19■□□□□ 0.98
TM6SF1-201ENST00000258909 SMC1AQ14683 1233 aaKnown RBP21.19■□□□□ 0.98
TM6SF1-201ENST00000258909 ZNF280BQ86YH2 543 aa21.19■□□□□ 0.98
TM6SF1-201ENST00000258909 PIGOQ8TEQ8 1089 aa21.19■□□□□ 0.98
TM6SF1-201ENST00000258909 PGBD4Q96DM1 585 aa21.19■□□□□ 0.98
TM6SF1-201ENST00000258909 LIMCH1Q9UPQ0 1083 aa21.19■□□□□ 0.98
TM6SF1-201ENST00000258909 FSD2A1L4K1 749 aa21.18■□□□□ 0.98
TM6SF1-201ENST00000258909 GAS2O43903 313 aaKnown RBP21.18■□□□□ 0.98
TM6SF1-201ENST00000258909 CXCL14O95715 111 aa21.18■□□□□ 0.98
TM6SF1-201ENST00000258909 GALTP07902 379 aa21.18■□□□□ 0.98
TM6SF1-201ENST00000258909 SRGAP2BP0DMP2 458 aa21.18■□□□□ 0.98
TM6SF1-201ENST00000258909 SYCE2Q6PIF2 218 aa21.18■□□□□ 0.98
TM6SF1-201ENST00000258909 TMEM184AQ6ZMB5 413 aa21.18■□□□□ 0.98
TM6SF1-201ENST00000258909 VPS52Q8N1B4 723 aa21.18■□□□□ 0.98
TM6SF1-201ENST00000258909 FAM122AQ96E09 287 aa21.18■□□□□ 0.98
TM6SF1-201ENST00000258909 S1PR5Q9H228 398 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms