RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 RPL13P26373 211 aaKnown RBP12.38□□□□□ -0.43
TROAP-201ENST00000257909 PCK1P35558 622 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 KNOP1Q1ED39 458 aaKnown RBP12.38□□□□□ -0.43
TROAP-201ENST00000257909 TRIM68Q6AZZ1 485 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 ANO7Q6IWH7 933 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 CCDC137Q6PK04 289 aaKnown RBP12.38□□□□□ -0.43
TROAP-201ENST00000257909 VSTM1Q6UX27 236 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 PRELID2Q8N945 189 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 PIGOQ8TEQ8 1089 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 STK32AQ8WU08 396 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 RMDN2Q96LZ7 410 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 MAGEB18Q96M61 343 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 TGS1Q96RS0 853 aaKnown RBP12.38□□□□□ -0.43
TROAP-201ENST00000257909 DDX25Q9UHL0 483 aaKnown RBP12.38□□□□□ -0.43
TROAP-201ENST00000257909 PCDHA12Q9UN75 941 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 TRIM33Q9UPN9 1127 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 POTEFA5A3E0 1075 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 E9PMD0 336 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 SLC16A3O15427 465 aaKnown RBP12.38□□□□□ -0.43
TROAP-201ENST00000257909 AP1G2O75843 785 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 CNGA1P29973 690 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 SOX5P35711 763 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 HADHBP55084 474 aaKnown RBP12.38□□□□□ -0.43
TROAP-201ENST00000257909 MXRA7P84157 204 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 MTFR1Q15390 333 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 TCERG1LQ5VWI1 586 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 SPTY2D1Q68D10 685 aaPredicted RBP12.38□□□□□ -0.43
TROAP-201ENST00000257909 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 POTEEQ6S8J3 1075 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 ARHGEF18Q6ZSZ5 1173 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 APBB1IPQ7Z5R6 666 aaPredicted RBP12.38□□□□□ -0.43
TROAP-201ENST00000257909 GLYCTKQ8IVS8 523 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 RHOT2Q8IXI1 618 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 ALG3Q92685 438 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 LRMDAQ9H2I8 198 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 KCNK9Q9NPC2 374 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 CYP39A1Q9NYL5 469 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 AJAP1Q9UKB5 411 aaPredicted RBP12.38□□□□□ -0.43
TROAP-201ENST00000257909 MINPP1Q9UNW1 487 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 KIAA1024Q9UPX6 916 aa12.38□□□□□ -0.43
TROAP-201ENST00000257909 TTLL1O95922 423 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 PLCG2P16885 1265 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 RASA1P20936 1047 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 ABCB4P21439 1286 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 STX2P32856 288 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 RAD23BP54727 409 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 CALCOCO2Q13137 446 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 SETDB1Q15047 1291 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 PDCD2Q16342 344 aaPredicted RBP12.37□□□□□ -0.43
TROAP-201ENST00000257909 LONRF1Q17RB8 773 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 TSNAXIP1Q2TAA8 658 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 ZNF568Q3ZCX4 644 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 UBAP2Q5T6F2 1119 aaKnown RBP12.37□□□□□ -0.43
TROAP-201ENST00000257909 INTS8Q75QN2 995 aaKnown RBP12.37□□□□□ -0.43
TROAP-201ENST00000257909 DZIP1Q86YF9 867 aaKnown RBP12.37□□□□□ -0.43
TROAP-201ENST00000257909 SH3TC2Q8TF17 1288 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 ZFAND2BQ8WV99 257 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 INPP5DQ92835 1189 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 HAS1Q92839 578 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 TMEM237Q96Q45 408 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 RIOX1Q9H6W3 641 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 THRAP3Q9Y2W1 955 aaKnown RBP12.37□□□□□ -0.43
TROAP-201ENST00000257909 PFASO15067 1338 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 NPHP3-ACAD11A0A0J9YXS1 232 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 ANKRD62A6NC57 917 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 EYA4O95677 639 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 TPBGLP0DKB5 382 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 ACADSP16219 412 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 HIBADHP31937 336 aaKnown RBP12.37□□□□□ -0.43
TROAP-201ENST00000257909 GCLCP48506 637 aaPredicted RBP12.37□□□□□ -0.43
TROAP-201ENST00000257909 RPS6KA3P51812 740 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
TROAP-201ENST00000257909 SEL1L2Q5TEA6 688 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 OTUD6AQ7L8S5 288 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 ENDOVQ8N8Q3 282 aaKnown RBP12.37□□□□□ -0.43
TROAP-201ENST00000257909 ANKRD42Q8N9B4 389 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 OLIG1Q8TAK6 271 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 UTP4Q969X6 686 aaKnown RBP12.37□□□□□ -0.43
TROAP-201ENST00000257909 SLC35C1Q96A29 364 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 STK33Q9BYT3 514 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 ZHX3Q9H4I2 956 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 NKX1-2Q9UD57 310 aaPredicted RBP12.37□□□□□ -0.43
TROAP-201ENST00000257909 NIP7Q9Y221 180 aaKnown RBP eCLIP12.37□□□□□ -0.43
TROAP-201ENST00000257909 IGSF9BQ9UPX0 1349 aa12.37□□□□□ -0.43
TROAP-201ENST00000257909 PEX11AO75192 247 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 AKAP3O75969 853 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 GNAT1P11488 350 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 TNNI2P48788 182 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 KLC1Q07866 573 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 MGAT5Q09328 741 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 STRN3Q13033 797 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 CYP1B1Q16678 543 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 C11orf63Q6NUN7 778 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 ECHDC2Q86YB7 292 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.36□□□□□ -0.43
TROAP-201ENST00000257909 CCDC105Q8IYK2 499 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms