RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 SIX2Q9NPC8 291 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 GCNT4Q9P109 453 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.23□□□□□ -0.45
PDE6B-201ENST00000255622 TSKSQ9UJT2 592 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 RAD51CO43502 376 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 ONECUT3O60422 494 aaPredicted RBP12.23□□□□□ -0.45
PDE6B-201ENST00000255622 HOXA7P31268 230 aaPredicted RBP12.23□□□□□ -0.45
PDE6B-201ENST00000255622 ECE1P42892 770 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 PPARDQ03181 441 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 EPHA7Q15375 998 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 KIAA1755Q5JYT7 1200 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 EMBQ6PCB8 327 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 FRMD5Q7Z6J6 570 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 TMCO5AQ8N6Q1 288 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 BCAS4Q8TDM0 211 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 SH3GL2Q99962 352 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 LUC7LQ9NQ29 371 aaKnown RBP12.23□□□□□ -0.45
PDE6B-201ENST00000255622 GDF3Q9NR23 364 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 NAGPAQ9UK23 515 aa12.23□□□□□ -0.45
PDE6B-201ENST00000255622 ECE2O60344 883 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 MMP10P09238 476 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 SNCBQ16143 134 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 DACT2Q5SW24 774 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 TMEM179Q6ZVK1 233 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 TPH2Q8IWU9 490 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 SLC35C1Q96A29 364 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 WDR18Q9BV38 432 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 AP1M1Q9BXS5 423 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 BCS1LQ9Y276 419 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 RABGAP1Q9Y3P9 1069 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 TBCAO75347 108 aaKnown RBP12.22□□□□□ -0.45
PDE6B-201ENST00000255622 IRAK1P51617 712 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 MOXD1Q6UVY6 613 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 IFT20Q8IY31 132 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 CAVIN3Q969G5 261 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 SPATA31A6Q5VVP1 1343 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 ZMYM2Q9UBW7 1377 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 TGFB1I1O43294 461 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 CALUO43852 315 aaPredicted RBP12.22□□□□□ -0.45
PDE6B-201ENST00000255622 SHOX2O60902 331 aaPredicted RBP12.22□□□□□ -0.45
PDE6B-201ENST00000255622 HSF2BPO75031 334 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 BMP3P12645 472 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 ALKBH5Q6P6C2 394 aaKnown RBP12.22□□□□□ -0.45
PDE6B-201ENST00000255622 NANOGNBQ7Z5D8 188 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 USP38Q8NB14 1042 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 MIPOL1Q8TD10 442 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 IDI2Q9BXS1 227 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 BRD8Q9H0E9 1235 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 FBXO9Q9UK97 447 aaPredicted RBP12.22□□□□□ -0.45
PDE6B-201ENST00000255622 N6AMT1Q9Y5N5 214 aa12.22□□□□□ -0.45
PDE6B-201ENST00000255622 PDXKO00764 312 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 PEX14O75381 377 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 RNF8O76064 485 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 GFPT2O94808 682 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 CFBP00751 764 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 FUT4P22083 530 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 ATP1A2P50993 1020 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 ADCY1Q08828 1119 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 RINT1Q6NUQ1 792 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 PODNQ7Z5L7 613 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 RNF168Q8IYW5 571 aaPredicted RBP12.21□□□□□ -0.45
PDE6B-201ENST00000255622 PLCB1Q9NQ66 1216 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 TYW1Q9NV66 732 aaKnown RBP12.21□□□□□ -0.45
PDE6B-201ENST00000255622 PRR12Q9ULL5 1215 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 GRIN2DO15399 1336 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 IGLV3-22A0A075B6J6 115 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 ZNF233A6NK53 670 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 LSM1O15116 133 aaKnown RBP12.21□□□□□ -0.45
PDE6B-201ENST00000255622 CEP104O60308 925 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 TNFRSF8P28908 595 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 RPS6KA1Q15418 735 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 CCDC174Q6PII3 467 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 DDX42Q86XP3 938 aaKnown RBP eCLIP12.21□□□□□ -0.45
PDE6B-201ENST00000255622 MFN1Q8IWA4 741 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 MYCT1Q8N699 235 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 LRRC57Q8N9N7 239 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 RUBCNQ92622 972 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 GMCL1Q96IK5 515 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 DYDC2Q96IM9 177 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 CAPS2Q9BXY5 557 aa12.21□□□□□ -0.45
PDE6B-201ENST00000255622 WRAP73Q9P2S5 460 aaPredicted RBP12.21□□□□□ -0.45
PDE6B-201ENST00000255622 TBX3O15119 743 aa12.21□□□□□ -0.46
PDE6B-201ENST00000255622 E2F6O75461 281 aa12.21□□□□□ -0.46
PDE6B-201ENST00000255622 EPB41P11171 864 aaKnown RBP12.21□□□□□ -0.46
PDE6B-201ENST00000255622 SLC8A3P57103 927 aa12.21□□□□□ -0.46
PDE6B-201ENST00000255622 GNGT1P63211 74 aa12.21□□□□□ -0.46
PDE6B-201ENST00000255622 SFSWAPQ12872 951 aaKnown RBP12.21□□□□□ -0.46
PDE6B-201ENST00000255622 AOC3Q16853 763 aa12.21□□□□□ -0.46
PDE6B-201ENST00000255622 GLE1Q53GS7 698 aaKnown RBP12.21□□□□□ -0.46
PDE6B-201ENST00000255622 CCDC80Q76M96 950 aa12.21□□□□□ -0.46
PDE6B-201ENST00000255622 GMCL1P1Q8NEA9 526 aa12.21□□□□□ -0.46
PDE6B-201ENST00000255622 FAM20AQ96MK3 541 aa12.21□□□□□ -0.46
PDE6B-201ENST00000255622 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.21□□□□□ -0.46
PDE6B-201ENST00000255622 TMEM98Q9Y2Y6 226 aa12.21□□□□□ -0.46
PDE6B-201ENST00000255622 OPA1O60313 960 aa12.2□□□□□ -0.46
PDE6B-201ENST00000255622 SLITRK3O94933 977 aa12.2□□□□□ -0.46
PDE6B-201ENST00000255622 JAM2P57087 298 aa12.2□□□□□ -0.46
PDE6B-201ENST00000255622 ZYXQ15942 572 aaKnown RBP12.2□□□□□ -0.46
PDE6B-201ENST00000255622 ACER1Q8TDN7 264 aa12.2□□□□□ -0.46
PDE6B-201ENST00000255622 MASTLQ96GX5 879 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms