RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 TSPY1Q01534 308 aa19.94■□□□□ 0.78
SMARCC1-201ENST00000254480 TMEM62Q0P6H9 643 aa19.94■□□□□ 0.78
SMARCC1-201ENST00000254480 ARHGEF37A1IGU5 675 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 H0Y3Z8 333 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 KRT10P13645 584 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 KRT76Q01546 638 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 ASNSD1Q9NWL6 643 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 ORC6Q9Y5N6 252 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 PPM1NQ8N819 430 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 RBAKQ9NYW8 714 aaPredicted RBP19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 A8MXQ7 604 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 PPP1R2P3Q6NXS1 205 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 LDHDQ86WU2 507 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 KIF12Q96FN5 646 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 TTC26A0AVF1 554 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 MMEP08473 750 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 KPNA2P52292 529 aaKnown RBP19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 MMTAG2Q9BU76 263 aaKnown RBP19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 PITPNM3Q9BZ71 974 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 SLC13A1Q9BZW2 595 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 SUGT1Q9Y2Z0 365 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 GNAT1P11488 350 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 CDR2Q01850 454 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 ANKRD20A4Q4UJ75 823 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 ANKRD20A8PQ5CZ79 823 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 ANKRD20A2Q5SQ80 823 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 ANKRD20A1Q5TYW2 823 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 ZC3H18Q86VM9 953 aaKnown RBP19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 CCNYL1Q8N7R7 359 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 FBXL13Q8NEE6 735 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 TRAIPQ9BWF2 469 aa19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 DHX35Q9H5Z1 703 aaKnown RBP19.93■□□□□ 0.78
SMARCC1-201ENST00000254480 DRP2Q13474 957 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 LRRC14Q15048 493 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 SLC10A5Q5PT55 438 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 FAM102AQ5T9C2 384 aaPredicted RBP19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 TSPYL2Q9H2G4 693 aaPredicted RBP19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 ARL4CP56559 192 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 KCNA1Q09470 495 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 FAM167AQ96KS9 214 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 FBXO40Q9UH90 709 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 DCTN4Q9UJW0 460 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 GPS1Q13098 491 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 MTF1Q14872 753 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 TAF1BQ53T94 588 aaPredicted RBP19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 C6orf118Q5T5N4 469 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 NCLNQ969V3 563 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 FAM20AQ96MK3 541 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 RPAP1Q9BWH6 1393 aaPredicted RBP19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 SDC4P31431 198 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 TNFAIP2Q03169 654 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 RNF149Q8NC42 400 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 ESRRBO95718 433 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 COPB2P35606 906 aa19.92■□□□□ 0.78
SMARCC1-201ENST00000254480 CCDC78A2IDD5 438 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 CTSHP09668 335 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 RECQLP46063 649 aaPredicted RBP19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 TMEM143Q96AN5 459 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 ISCA1Q9BUE6 129 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 ACAD9Q9H845 621 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 STK36Q9NRP7 1315 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 MXD4Q14582 209 aaPredicted RBP19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 GGCXP38435 758 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 GRAMD1BQ3KR37 738 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 PPP1R36Q96LQ0 422 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 GOLGA8QA0A0J9YX86 632 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 GOLGA8OA6NCC3 632 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 GOLGA8NF8WBI6 632 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 CRLF3Q8IUI8 442 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 CPB1P15086 417 aa19.91■□□□□ 0.78
SMARCC1-201ENST00000254480 DFFAO00273 331 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 SPAG7O75391 227 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 CHEK2O96017 543 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 DHX40Q8IX18 779 aaKnown RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 GIMAP8Q8ND71 665 aaPredicted RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 VPS39Q96JC1 886 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 CNOT10Q9H9A5 744 aaKnown RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 MYO3BQ8WXR4 1341 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 PNMA6AP0CW24 399 aaPredicted RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 GNL1P36915 607 aaPredicted RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 PSMC5P62195 406 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 ADCY2Q08462 1091 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 RBM41Q96IZ5 413 aaKnown RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 EIF4E1BA6NMX2 242 aaKnown RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 CYP26A1O43174 497 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 ACOT2P49753 483 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 MAGOHP61326 146 aaKnown RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 ALS2CLQ60I27 953 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 SLC30A5Q8TAD4 765 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 MRPL4Q9BYD3 311 aaKnown RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 ALG13Q9NP73 1137 aaKnown RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 SNX2O60749 519 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 ERFP50548 548 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 CUL1Q13616 776 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 BEND6Q5SZJ8 279 aaPredicted RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 ANKRD40Q6AI12 368 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 ZNF579Q8NAF0 562 aaKnown RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 AGO2Q9UKV8 859 aaKnown RBP19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 NOP14P78316 857 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms